LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_009200
hsa-miR-150-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019375
Biotype: transcript isomorph
Gene id: XLOC_009200
Gene Name: XLOC_009200
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1261-1280
0.027
0
6mer
47-66
0.004
0
6mer
703-729
0.003
0
FAM138A
hsa-miR-150-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000461467
Biotype: lincRNA
Gene id: ENSG00000237613
Gene Name: FAM138A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
315-337
0.034
4
RP11-386G11.10
hsa-miR-150-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000551496
Biotype: antisense
Gene id: ENSG00000258017
Gene Name: RP11-386G11.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
272-292
0.034
2
XLOC_010268
hsa-miR-150-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00021007
Biotype: transcript isomorph
Gene id: XLOC_010268
Gene Name: XLOC_010268
UCSC graphic: -
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
168-192
0.022
2
7mer
682-702
0.012
0
LINC00663
hsa-miR-150-5p
0.810
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586645
Biotype: lincRNA
Gene id: ENSG00000266904
Gene Name: LINC00663
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
400-422
0.023
1
6mer
1317-1334
0.011
1
ZFAS1
hsa-miR-150-5p
0.810
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000623640
Biotype: antisense
Gene id: ENSG00000177410
Gene Name: ZFAS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
599-614
0.026
0
8mer
443-460
0.008
1
RP11-353N14.5
hsa-miR-150-5p
0.810
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000576738
Biotype: lincRNA
Gene id: ENSG00000262585
Gene Name: RP11-353N14.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
561-581
0.016
1
7mer
1247-1252
0.005
1
7mer
2666-2690
0.005
1
6mer
686-708
0.002
1
8mer
2268-2295
0.002
Not Conserved
7mer
1191-1217
0.002
0
6mer
3601-3628
0.001
2
6mer
3293-3319
0.001
1
6mer
959-982
0.001
1
RP1-140K8.5
hsa-miR-150-5p
0.810
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000566733
Biotype: lincRNA
Gene id: ENSG00000260604
Gene Name: RP1-140K8.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6561-6579
0.015
1
7mer
4574-4597
0.008
2
7mer
1049-1068
0.006
1
6mer
358-380
0.003
1
6mer
6347-6373
0.002
1
CEBPB-AS1
hsa-miR-150-5p
0.810
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000613921
Biotype: antisense
Gene id: ENSG00000277449
Gene Name: CEBPB-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
665-686
0.014
1
7mer
1435-1462
0.008
0
7mer
311-336
0.004
1
7mer
948-958
0.003
1
6mer
279-294
0.003
0
6mer
1884-1907
0.002
1
RP11-400F19.6
hsa-miR-150-5p
0.810
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000590513
Biotype: antisense
Gene id: ENSG00000266962
Gene Name: RP11-400F19.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
673-690
0.015
2
7mer
126-141
0.011
1
8mer
133-156
0.007
Not Conserved
6mer
1542-1564
0.002
3
LINC01519
hsa-miR-150-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000454178
Biotype: lincRNA
Gene id: ENSG00000237267
Gene Name: LINC01519
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
114-139
0.011
0
6mer
230-250
0.009
5
7mer
1365-1382
0.005
1
7mer
1426-1451
0.004
1
7mer
1290-1315
0.003
1
6mer
1260-1282
0.001
1
LINCMD1
hsa-miR-150-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000418518
Biotype: lincRNA
Gene id: ENSG00000225613
Gene Name: LINCMD1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
15-36
0.013
2
7mer
205-221
0.007
0
7mer
284-305
0.006
Not Conserved
6mer
141-166
0.005
1
6mer
221-241
0.003
0
NDUFV2-AS1
hsa-miR-150-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000583081
Biotype: antisense
Gene id: ENSG00000266053
Gene Name: NDUFV2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
189-207
0.034
2
RP11-221J22.2
hsa-miR-150-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000498624
Biotype: lincRNA
Gene id: ENSG00000241280
Gene Name: RP11-221J22.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
261-278
0.020
1
8mer
395-412
0.014
2
RP11-447M4.1
hsa-miR-150-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000570082
Biotype: lincRNA
Gene id: ENSG00000260670
Gene Name: RP11-447M4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2577-2601
0.016
0
7mer
2861-2881
0.013
2
6mer
367-372
0.003
2
6mer
1929-1950
0.002
2
LOC101927446
hsa-miR-150-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_110085.1
Biotype: sense
Gene id: NR_110085.1 (gene)
Gene Name: LOC101927446
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1931-1947
0.030
1
6mer
120-142
0.005
0
NDUFA6-AS1
hsa-miR-150-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000608643
Biotype: retained_intron
Gene id: ENSG00000237037
Gene Name: NDUFA6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
448-465
0.019
1
7mer
243-253
0.006
0
6mer
623-647
0.004
4
6mer
393-417
0.002
1
TCL6
hsa-miR-150-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000619182
Biotype: processed_transcript
Gene id: ENSG00000187621
Gene Name: TCL6
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1395-1421
0.014
5
7mer
1015-1032
0.008
1
6mer
264-283
0.004
4
6mer
1380-1401
0.004
1
6mer
669-684
0.002
1
6mer
1761-1783
0.002
1
XLOC_007956
hsa-miR-150-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017154
Biotype: transcript isomorph
Gene id: XLOC_007956
Gene Name: XLOC_007956
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
392-418
0.034
2
LINC00152
hsa-miR-150-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000331944
Biotype: lincRNA
Gene id: ENSG00000222041
Gene Name: LINC00152
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
209-229
0.034
7
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