LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
KB-1552D7.2
hsa-miR-150-5p
0.815
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000319051
Biotype: pseudogene
Gene id: ENSG00000179577
Gene Name: KB-1552D7.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1702-1728
0.035
1
XLOC_009833
hsa-miR-150-5p
0.815
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020516
Biotype: transcript isomorph
Gene id: XLOC_009833
Gene Name: XLOC_009833
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
16-29
0.035
1
MIR4435-1HG
hsa-miR-150-5p
0.815
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000441075
Biotype: lincRNA
Gene id: ENSG00000172965
Gene Name: MIR4435-1HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
167-188
0.035
6
SRD5A3-AS1
hsa-miR-150-5p
0.815
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000608086
Biotype: antisense
Gene id: ENSG00000249700
Gene Name: SRD5A3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
279-289
0.021
1
7mer
649-659
0.007
1
6mer
99-124
0.006
6
XX-CR54.1
hsa-miR-150-5p
0.815
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000437830
Biotype: lincRNA
Gene id: ENSG00000229703
Gene Name: XX-CR54.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
22-36
0.035
4
LINC01128
hsa-miR-150-5p
0.814
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000445118
Biotype: lincRNA
Gene id: ENSG00000228794
Gene Name: LINC01128
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5122-5147
0.028
1
6mer
5563-5584
0.002
1
6mer
6067-6072
0.002
Not Conserved
6mer
4636-4656
0.002
3
6mer
4519-4531
0.001
Not Conserved
6mer
4556-4573
0.001
1
RP11-15H20.6
hsa-miR-150-5p
0.814
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000593324
Biotype: lincRNA
Gene id: ENSG00000213971
Gene Name: RP11-15H20.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
847-869
0.019
0
7mer
596-616
0.016
0
KB-1552D7.2
hsa-miR-150-5p
0.814
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000622091
Biotype: sense_intronic
Gene id: ENSG00000179577
Gene Name: KB-1552D7.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1703-1729
0.035
1
RP11-83A24.2
hsa-miR-150-5p
0.814
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000608661
Biotype: antisense
Gene id: ENSG00000273247
Gene Name: RP11-83A24.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2177-2192
0.023
1
6mer
425-439
0.004
0
7mer
1270-1280
0.003
1
6mer
2336-2353
0.003
4
6mer
1464-1483
0.002
1
6mer
1109-1124
0.001
0
ADORA2A-AS1
hsa-miR-150-5p
0.814
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: NR_028483.1
Biotype: antisense
Gene id: NR_028483.1 (gene)
Gene Name: ADORA2A-AS1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1427-1450
0.019
2
6mer
1443-1462
0.011
7
7mer
505-515
0.005
1
LINC00473
hsa-miR-150-5p
0.814
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: NR_026861.1
Biotype: sense
Gene id: NR_026861.1 (gene)
Gene Name: LINC00473
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
564-589
0.016
Not Conserved
6mer
65-79
0.004
1
6mer
201-224
0.004
0
6mer
995-1007
0.003
1
6mer
292-310
0.003
0
6mer
474-498
0.002
1
6mer
519-536
0.002
1
OIP5-AS1
hsa-miR-150-5p
0.814
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000558945
Biotype: antisense
Gene id: ENSG00000247556
Gene Name: OIP5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1152-1177
0.014
1
7mer
276-302
0.014
1
7mer
1136-1146
0.007
1
RNASEH2B-AS1
hsa-miR-150-5p
0.814
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000596992
Biotype: antisense
Gene id: ENSG00000233672
Gene Name: RNASEH2B-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
584-603
0.035
1
MIR4435-1HG
hsa-miR-150-5p
0.813
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000442293
Biotype: lincRNA
Gene id: ENSG00000172965
Gene Name: MIR4435-1HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
287-302
0.035
6
U52111.14
hsa-miR-150-5p
0.813
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000434284
Biotype: antisense
Gene id: ENSG00000232725
Gene Name: U52111.14
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
71-88
0.026
2
6mer
835-848
0.004
0
6mer
626-648
0.002
1
6mer
807-827
0.002
0
AC008060.7
hsa-miR-150-5p
0.813
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000401499
Biotype: lincRNA
Gene id: ENSG00000218672
Gene Name: AC008060.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1056-1078
0.025
0
7mer
1449-1474
0.007
1
6mer
188-213
0.003
1
XLOC_001229
hsa-miR-150-5p
0.813
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001844
Biotype: transcript isomorph
Gene id: XLOC_001229
Gene Name: XLOC_001229
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
290-312
0.035
2
RP11-358D14.2
hsa-miR-150-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000436263
Biotype: antisense
Gene id: ENSG00000226390
Gene Name: RP11-358D14.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
45-49
0.020
1
7mer
615-630
0.015
0
MIR143HG
hsa-miR-150-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_105060.1
Biotype: lincRNA
Gene id: NR_105060.1 (gene)
Gene Name: MIR143HG
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
740-755
0.035
9
SLC8A1-AS1
hsa-miR-150-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000601679
Biotype: antisense
Gene id: ENSG00000227028
Gene Name: SLC8A1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
385-400
0.025
4
7mer
539-553
0.007
0
6mer
142-167
0.003
0
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