LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
LINC00331
hsa-miR-150-5p
0.822
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000446391
Biotype: lincRNA
Gene id: ENSG00000225427
Gene Name: LINC00331
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
128-150
0.036
7
RP11-450H6.3
hsa-miR-150-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000567967
Biotype: lincRNA
Gene id: ENSG00000260385
Gene Name: RP11-450H6.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1675-1700
0.036
0
CTD-2050B12.1
hsa-miR-150-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565441
Biotype: lincRNA
Gene id: ENSG00000261013
Gene Name: CTD-2050B12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
220-238
0.031
1
6mer
563-567
0.004
0
SC22CB-109E1.1
hsa-miR-150-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623290
Biotype: lincRNA
Gene id: ENSG00000279582
Gene Name: SC22CB-109E1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
9745-9766
0.018
1
7mer
9725-9735
0.010
1
7mer
3397-3423
0.004
0
6mer
1850-1876
0.001
1
6mer
7202-7222
0.001
1
6mer
8724-8738
0.001
1
XLOC_000318
hsa-miR-150-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001079
Biotype: transcript isomorph
Gene id: XLOC_000318
Gene Name: XLOC_000318
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8946-8965
0.006
1
7mer
9003-9028
0.006
1
7mer
9136-9161
0.005
0
7mer
4615-4623
0.005
1
7mer
664-688
0.005
0
7mer
7011-7036
0.003
0
7mer
6690-6700
0.003
0
6mer
4002-4015
0.002
2
6mer
4422-4438
0.001
1
RP11-372E1.4
hsa-miR-150-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000476385
Biotype: antisense
Gene id: ENSG00000243818
Gene Name: RP11-372E1.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1734-1750
0.032
2
6mer
1376-1394
0.004
1
XLOC_006253
hsa-miR-150-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013599
Biotype: transcript isomorph
Gene id: XLOC_006253
Gene Name: XLOC_006253
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
711-717
0.017
0
7mer
1829-1847
0.005
2
6mer
5127-5151
0.005
1
7mer
540-562
0.004
1
7mer
3872-3882
0.003
0
6mer
2346-2367
0.002
6
LINC00176
hsa-miR-150-5p
0.821
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000431158
Biotype: lincRNA
Gene id: ENSG00000196421
Gene Name: LINC00176
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2644-2670
0.023
7
7mer
159-184
0.006
1
7mer
342-359
0.004
1
8mer+wobble
1011-1032
0.001
Not Conserved
6mer
1629-1647
0.001
0
XLOC_010743
hsa-miR-150-5p
0.820
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00022133
Biotype: transcript isomorph
Gene id: XLOC_010743
Gene Name: XLOC_010743
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7452-7475
0.023
1
7mer
2651-2666
0.003
0
6mer
6573-6596
0.002
0
6mer
481-507
0.002
0
6mer
3449-3468
0.002
1
6mer
1691-1710
0.001
1
6mer
4120-4144
0.001
1
6mer
3977-3996
0.001
1
6mer
2496-2523
0.001
0
6mer
3934-3955
0.000
0
CTA-544A11.1
hsa-miR-150-5p
0.820
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624411
Biotype: antisense
Gene id: ENSG00000279802
Gene Name: CTA-544A11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
960-982
0.016
3
6mer
138-146
0.004
3
7mer
8409-8433
0.003
0
6mer
39-55
0.003
1
7mer
4640-4650
0.002
1
6mer
4075-4094
0.002
1
6mer
5763-5786
0.002
1
6mer
1593-1615
0.002
2
6mer
8585-8600
0.001
1
6mer
2165-2179
0.001
0
6mer
4183-4210
0.001
3
XLOC_014162
hsa-miR-150-5p
0.820
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029320
Biotype: transcript isomorph
Gene id: XLOC_014162
Gene Name: XLOC_014162
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5108-5130
0.007
1
7mer
5242-5265
0.005
1
7mer
699-715
0.004
0
7mer
4159-4183
0.004
1
6mer
1727-1731
0.003
6
7mer
1209-1234
0.003
1
7mer
726-744
0.003
1
6mer
2152-2167
0.002
5
7mer
3860-3870
0.002
1
6mer
1385-1405
0.002
5
6mer
4327-4352
0.001
1
6mer
4177-4196
0.001
0
CAPN10-AS1
hsa-miR-150-5p
0.820
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000567819
Biotype: antisense
Gene id: ENSG00000260942
Gene Name: CAPN10-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3580-3599
0.015
2
7mer
3324-3342
0.011
1
7mer
2343-2368
0.004
1
6mer
3732-3753
0.003
1
6mer
3494-3517
0.002
1
7mer
1724-1734
0.002
0
MIR497HG
hsa-miR-150-5p
0.820
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000572453
Biotype: antisense
Gene id: ENSG00000267532
Gene Name: MIR497HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
435-440
0.016
6
6mer
3567-3587
0.005
6
6mer
3758-3783
0.004
4
8mer+wobble
1633-1649
0.002
1
6mer
590-613
0.002
2
6mer
805-822
0.001
1
6mer
1930-1953
0.001
3
8mer+mismatch
2921-2941
0.001
3
6mer
2076-2100
0.001
5
6mer
2538-2555
0.001
1
TMEM191C
hsa-miR-150-5p
0.820
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000545656
Biotype: lincRNA
Gene id: ENSG00000206140
Gene Name: TMEM191C
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
208-221
0.022
1
7mer
227-253
0.013
1
RP11-909M7.3
hsa-miR-150-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: NR_110178.1
Biotype: lincRNA
Gene id: NR_110178.1 (gene)
Gene Name: RP11-909M7.3
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
831-844
0.016
0
7mer
681-703
0.010
1
8mer
763-785
0.009
1
LINC01442
hsa-miR-150-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000414201
Biotype: lincRNA
Gene id: ENSG00000227510
Gene Name: LINC01442
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
456-481
0.034
1
6mer
148-175
0.001
0
AC024560.2
hsa-miR-150-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000424493
Biotype: lincRNA
Gene id: ENSG00000236833
Gene Name: AC024560.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
343-369
0.035
0
LINC01477
hsa-miR-150-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000566101
Biotype: lincRNA
Gene id: ENSG00000261715
Gene Name: LINC01477
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
580-593
0.035
0
XLOC_012665
hsa-miR-150-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026191
Biotype: transcript isomorph
Gene id: XLOC_012665
Gene Name: XLOC_012665
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
580-593
0.035
0
XLOC_000730
hsa-miR-150-5p
0.819
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000016
Biotype: transcript isomorph
Gene id: XLOC_000730
Gene Name: XLOC_000730
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Liver Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1704-1727
0.024
3
6mer
766-784
0.003
1
7mer
2006-2029
0.003
1
7mer
2933-2950
0.002
0
6mer
2403-2429
0.001
2
6mer
3183-3205
0.001
0
6mer
1230-1249
0.001
1
6mer
1138-1154
0.000
0
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