LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
LINC00483
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000576150
Biotype: retained_intron
Gene id: ENSG00000167117
Gene Name: LINC00483
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
409-429
0.023
1
6mer
326-347
0.007
5
6mer
844-862
0.005
4
6mer
304-319
0.002
1
RP11-12L8.1
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000438885
Biotype: lincRNA
Gene id: ENSG00000228127
Gene Name: RP11-12L8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
933-954
0.021
3
7mer
478-505
0.016
7
DNM3OS
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_038397.2
Biotype: antisense
Gene id: NR_038397.2 (gene)
Gene Name: DNM3OS
UCSC graphic: -
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4028-4045
0.020
2
7mer
3660-3683
0.008
6
6mer
7786-7811
0.004
4
7mer
6645-6662
0.002
4
6mer
1433-1459
0.002
0
6mer
7661-7684
0.001
3
XLOC_014362
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029691
Biotype: transcript isomorph
Gene id: XLOC_014362
Gene Name: XLOC_014362
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
9-25
0.003
Not Conserved
6mer
31-47
0.003
Not Conserved
6mer
53-69
0.003
Not Conserved
6mer
75-91
0.003
Not Conserved
6mer
97-113
0.003
Not Conserved
6mer
119-135
0.003
Not Conserved
6mer
141-157
0.003
Not Conserved
6mer
207-223
0.002
Not Conserved
6mer
185-201
0.002
Not Conserved
6mer
163-189
0.002
Not Conserved
6mer
229-241
0.002
Not Conserved
6mer
251-263
0.002
Not Conserved
6mer
273-285
0.002
Not Conserved
6mer
317-340
0.002
Not Conserved
XLOC_010068
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020244
Biotype: transcript isomorph
Gene id: XLOC_010068
Gene Name: XLOC_010068
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2333-2353
0.010
0
7mer
238-248
0.009
1
7mer
2096-2122
0.005
1
6mer
2346-2368
0.004
1
6mer
2109-2127
0.003
1
6mer
2449-2474
0.002
Not Conserved
6mer
1803-1824
0.002
1
6mer
2054-2071
0.001
1
XLOC_000360
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000052
Biotype: transcript isomorph
Gene id: XLOC_000360
Gene Name: XLOC_000360
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
933-954
0.021
3
7mer
478-505
0.016
7
LINC01271
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000441214
Biotype: lincRNA
Gene id: ENSG00000233077
Gene Name: LINC01271
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
239-259
0.018
1
7mer
913-933
0.011
1
6mer
2134-2148
0.005
3
6mer
1979-1992
0.003
2
RP11-510M2.6
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000569271
Biotype: antisense
Gene id: ENSG00000260520
Gene Name: RP11-510M2.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
35-51
0.034
0
6mer
198-222
0.003
1
LINC00485
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: NR_033855.1
Biotype: lincRNA
Gene id: NR_033855.1 (gene)
Gene Name: LINC00485
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
679-689
0.030
0
7mer
1270-1293
0.007
1
XLOC_007304
hsa-miR-150-5p
0.829
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016545
Biotype: transcript isomorph
Gene id: XLOC_007304
Gene Name: XLOC_007304
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
44-54
0.033
7
6mer
534-560
0.004
4
RP1-18D14.7
hsa-miR-150-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000422216
Biotype: antisense
Gene id: ENSG00000226252
Gene Name: RP1-18D14.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
278-303
0.019
1
6mer
3443-3465
0.005
3
7mer
296-323
0.004
2
6mer
153-175
0.003
0
6mer
771-785
0.002
1
6mer
1335-1360
0.001
0
6mer
2689-2708
0.001
5
6mer
1654-1678
0.001
0
XLOC_010929
hsa-miR-150-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022626
Biotype: transcript isomorph
Gene id: XLOC_010929
Gene Name: XLOC_010929
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1064-1079
0.014
3
7mer
697-710
0.006
0
7mer
3154-3179
0.006
1
7mer
3292-3312
0.004
0
6mer
2457-2477
0.003
2
6mer
211-237
0.002
0
6mer
2520-2536
0.002
2
AC108488.4
hsa-miR-150-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000439547
Biotype: lincRNA
Gene id: ENSG00000242282
Gene Name: AC108488.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
412-434
0.036
0
LINC00485
hsa-miR-150-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547179
Biotype: lincRNA
Gene id: ENSG00000258169
Gene Name: LINC00485
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
682-692
0.030
0
7mer
1273-1296
0.007
1
XLOC_006901
hsa-miR-150-5p
0.828
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014831
Biotype: transcript isomorph
Gene id: XLOC_006901
Gene Name: XLOC_006901
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
104-128
0.036
0
CTC-559E9.6
hsa-miR-150-5p
0.827
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000589657
Biotype: antisense
Gene id: ENSG00000267419
Gene Name: CTC-559E9.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
253-271
0.036
1
EFCAB6-AS1
hsa-miR-150-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000431327
Biotype: antisense
Gene id: ENSG00000223843
Gene Name: EFCAB6-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2256-2278
0.021
1
7mer
2242-2265
0.007
1
6mer
2108-2131
0.003
1
6mer
648-665
0.003
1
6mer
1140-1152
0.002
1
CTD-3064M3.4
hsa-miR-150-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000501440
Biotype: antisense
Gene id: ENSG00000244998
Gene Name: CTD-3064M3.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
523-541
0.013
1
7mer
231-255
0.010
1
9mer
600-627
0.009
0
6mer
1186-1209
0.003
1
RP11-61F12.1
hsa-miR-150-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564809
Biotype: antisense
Gene id: ENSG00000261471
Gene Name: RP11-61F12.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2007-2032
0.022
1
7mer
2375-2391
0.012
1
6mer
1719-1742
0.002
1
XLOC_006690
hsa-miR-150-5p
0.826
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014580
Biotype: transcript isomorph
Gene id: XLOC_006690
Gene Name: XLOC_006690
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Colon Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
59-80
0.025
0
6mer
153-166
0.006
1
6mer
198-224
0.004
1
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