LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-96L14.7
hsa-miR-150-5p
0.842
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000414762
Biotype: antisense
Gene id: ENSG00000236782
Gene Name: RP11-96L14.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
202-219
0.024
5
8mer
181-193
0.014
3
PROX1-AS1
hsa-miR-150-5p
0.841
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000608399
Biotype: antisense
Gene id: ENSG00000230461
Gene Name: PROX1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
572-592
0.032
2
6mer
247-262
0.006
6
XLOC_000633
hsa-miR-150-5p
0.841
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001335
Biotype: transcript isomorph
Gene id: XLOC_000633
Gene Name: XLOC_000633
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4160-4182
0.008
Not Conserved
7mer
5631-5657
0.007
1
7mer
3055-3065
0.004
2
7mer
6458-6473
0.003
0
6mer
643-657
0.003
1
7mer
1905-1915
0.003
1
7mer
6295-6305
0.003
0
7mer
6416-6441
0.002
1
6mer
4383-4405
0.002
3
6mer
5966-5980
0.002
1
6mer
1074-1097
0.001
1
RP11-10K16.1
hsa-miR-150-5p
0.839
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000499322
Biotype: antisense
Gene id: ENSG00000245213
Gene Name: RP11-10K16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
334-350
0.031
0
7mer
717-727
0.005
1
6mer
550-576
0.001
0
CTD-2189E23.1
hsa-miR-150-5p
0.839
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000592263
Biotype: lincRNA
Gene id: ENSG00000267723
Gene Name: CTD-2189E23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
596-623
0.038
2
LINC01204
hsa-miR-150-5p
0.839
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000609127
Biotype: lincRNA
Gene id: ENSG00000229563
Gene Name: LINC01204
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
412-426
0.026
2
7mer
2452-2477
0.006
0
7mer
2587-2612
0.006
0
MIR3911
hsa-miR-150-5p
0.839
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000624141
Biotype: lincRNA
Gene id: ENSG00000279571
Gene Name: MIR3911
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
500-524
0.013
2
7mer
216-240
0.008
1
6mer
337-357
0.006
8
7mer
246-260
0.005
1
6mer
197-211
0.005
6
XLOC_005397
hsa-miR-150-5p
0.838
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011893
Biotype: transcript isomorph
Gene id: XLOC_005397
Gene Name: XLOC_005397
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
357-374
0.038
0
RP11-521E5.1
hsa-miR-150-5p
0.838
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000508942
Biotype: lincRNA
Gene id: ENSG00000251326
Gene Name: RP11-521E5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
589-609
0.038
1
RP11-102L12.2
hsa-miR-150-5p
0.837
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560231
Biotype: antisense
Gene id: ENSG00000259326
Gene Name: RP11-102L12.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
455-472
0.038
8
RP11-144A16.8
hsa-miR-150-5p
0.837
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000611126
Biotype: lincRNA
Gene id: ENSG00000276422
Gene Name: RP11-144A16.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
255-265
0.037
1
CTA-243E7.4
hsa-miR-150-5p
0.837
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623888
Biotype: antisense
Gene id: ENSG00000279085
Gene Name: CTA-243E7.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4976-4998
0.007
1
7mer
155-165
0.005
1
7mer
4841-4851
0.005
1
7mer
752-762
0.005
1
7mer
1858-1869
0.003
1
7mer
1584-1607
0.003
1
7mer
2844-2854
0.003
Not Conserved
7mer
2208-2218
0.003
0
7mer
1720-1730
0.002
1
6mer
3161-3186
0.002
2
6mer
431-453
0.001
1
LINC00969
hsa-miR-150-5p
0.837
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000445430
Biotype: lincRNA
Gene id: ENSG00000242086
Gene Name: LINC00969
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3462-3489
0.031
0
6mer
625-646
0.003
0
6mer
3606-3622
0.003
0
6mer
2678-2690
0.001
1
RP11-60A8.1
hsa-miR-150-5p
0.837
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000513379
Biotype: lincRNA
Gene id: ENSG00000249743
Gene Name: RP11-60A8.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
663-687
0.037
8
RP11-725G5.2
hsa-miR-150-5p
0.837
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554522
Biotype: lincRNA
Gene id: ENSG00000258630
Gene Name: RP11-725G5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
962-984
0.019
0
7mer
154-179
0.014
1
6mer
1467-1494
0.005
4
RP11-434D9.1
hsa-miR-150-5p
0.836
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000515227
Biotype: lincRNA
Gene id: ENSG00000249364
Gene Name: RP11-434D9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
495-518
0.037
5
RP11-364B6.1
hsa-miR-150-5p
0.836
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000418362
Biotype: lincRNA
Gene id: ENSG00000215869
Gene Name: RP11-364B6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
813-835
0.014
0
7mer
144-168
0.012
0
7mer
937-959
0.007
0
6mer
60-73
0.005
0
RP11-274H2.5
hsa-miR-150-5p
0.835
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000567714
Biotype: sense_overlapping
Gene id: ENSG00000261051
Gene Name: RP11-274H2.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
447-471
0.022
1
9mer
1390-1408
0.016
0
RP11-747H7.3
hsa-miR-150-5p
0.835
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000565058
Biotype: sense_intronic
Gene id: ENSG00000260711
Gene Name: RP11-747H7.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2958-2976
0.011
4
7mer
6640-6654
0.006
0
6mer
457-481
0.005
2
6mer
162-178
0.005
0
7mer
1333-1338
0.003
0
6mer
340-366
0.002
1
6mer
3665-3677
0.002
0
6mer
2584-2600
0.002
3
XLOC_012736
hsa-miR-150-5p
0.835
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026386
Biotype: transcript isomorph
Gene id: XLOC_012736
Gene Name: XLOC_012736
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3365-3380
0.029
1
7mer
945-954
0.006
1
6mer
2263-2288
0.002
1
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