LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
CTD-2383I20.1
hsa-miR-150-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506305
Biotype: lincRNA
Gene id: ENSG00000249994
Gene Name: CTD-2383I20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
592-608
0.039
2
RP11-153N17.1
hsa-miR-150-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000441295
Biotype: lincRNA
Gene id: ENSG00000233960
Gene Name: RP11-153N17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
411-430
0.032
0
6mer
258-274
0.004
0
6mer
534-551
0.003
Not Conserved
XLOC_013011
hsa-miR-150-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026953
Biotype: transcript isomorph
Gene id: XLOC_013011
Gene Name: XLOC_013011
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
133-149
0.039
0
LINC00614
hsa-miR-150-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000433966
Biotype: lincRNA
Gene id: ENSG00000236983
Gene Name: LINC00614
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
49-63
0.039
1
RP11-256I9.3
hsa-miR-150-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000562656
Biotype: lincRNA
Gene id: ENSG00000260364
Gene Name: RP11-256I9.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
482-500
0.037
1
6mer
88-114
0.002
0
XLOC_008705
hsa-miR-150-5p
0.846
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00017683
Biotype: transcript isomorph
Gene id: XLOC_008705
Gene Name: XLOC_008705
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1835-1854
0.033
1
7mer
1533-1558
0.006
2
TMEM161B-AS1
hsa-miR-150-5p
0.845
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000504636
Biotype: antisense
Gene id: ENSG00000247828
Gene Name: TMEM161B-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
887-914
0.038
0
AE000662.93
hsa-miR-150-5p
0.845
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557232
Biotype: lincRNA
Gene id: ENSG00000259054
Gene Name: AE000662.93
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
92-111
0.023
5
6mer
192-215
0.007
7
6mer
133-154
0.006
6
6mer
272-296
0.003
1
XLOC_001486
hsa-miR-150-5p
0.844
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003698
Biotype: transcript isomorph
Gene id: XLOC_001486
Gene Name: XLOC_001486
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
149-171
0.032
1
7mer
456-466
0.006
0
RP3-395M20.8
hsa-miR-150-5p
0.844
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000449660
Biotype: lincRNA
Gene id: ENSG00000238164
Gene Name: RP3-395M20.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
98-108
0.018
1
7mer
1302-1321
0.007
0
6mer
219-235
0.005
1
6mer
1276-1301
0.003
1
6mer
1496-1521
0.003
Not Conserved
6mer
1222-1245
0.002
1
LINC00152
hsa-miR-150-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000455131
Biotype: lincRNA
Gene id: ENSG00000222041
Gene Name: LINC00152
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
517-538
0.038
7
RP11-123M21.1
hsa-miR-150-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000546563
Biotype: lincRNA
Gene id: ENSG00000257948
Gene Name: RP11-123M21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
79-106
0.038
1
RP11-340I6.7
hsa-miR-150-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000596569
Biotype: lincRNA
Gene id: ENSG00000236299
Gene Name: RP11-340I6.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
763-788
0.038
0
RP11-982M15.8
hsa-miR-150-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000564585
Biotype: lincRNA
Gene id: ENSG00000260792
Gene Name: RP11-982M15.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
373-378
0.023
1
7mer
3216-3239
0.014
1
6mer
2358-2370
0.002
0
PROX1-AS1
hsa-miR-150-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000608138
Biotype: antisense
Gene id: ENSG00000230461
Gene Name: PROX1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
660-680
0.032
2
6mer
335-350
0.006
6
KC6
hsa-miR-150-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000600644
Biotype: lincRNA
Gene id: ENSG00000267313
Gene Name: KC6
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
160-182
0.028
4
8mer
1889-1902
0.008
Not Conserved
6mer
1101-1111
0.002
3
RNASEH2B-AS1
hsa-miR-150-5p
0.843
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000593750
Biotype: antisense
Gene id: ENSG00000233672
Gene Name: RNASEH2B-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
418-437
0.038
1
CTD-2313J23.1
hsa-miR-150-5p
0.842
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000566929
Biotype: lincRNA
Gene id: ENSG00000260072
Gene Name: CTD-2313J23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2311-2329
0.009
0
7mer
6141-6163
0.009
0
8mer
1288-1314
0.005
1
7mer
1916-1942
0.004
2
6mer
6260-6285
0.004
2
6mer
1090-1114
0.002
0
6mer
4623-4645
0.002
1
6mer
3001-3027
0.001
0
7mer
4777-4799
0.001
1
6mer
2987-3007
0.000
0
6mer
2969-2991
0.000
0
6mer
2963-2979
0.000
0
NEAT1
hsa-miR-150-5p
0.842
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000501122
Biotype: lincRNA
Gene id: ENSG00000245532
Gene Name: NEAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
16623-16648
0.004
Not Conserved
7mer
4131-4150
0.004
2
6mer
65-88
0.003
1
7mer
19837-19847
0.003
1
6mer
257-284
0.002
2
6mer
7281-7304
0.002
1
6mer
22603-22623
0.002
1
6mer
22377-22400
0.002
1
7mer
17918-17945
0.002
1
6mer
327-352
0.002
1
6mer
1175-1197
0.002
1
7mer
17785-17810
0.001
1
6mer
4538-4564
0.001
1
6mer
11678-11698
0.001
1
6mer
1837-1862
0.001
2
6mer
17727-17745
0.001
1
6mer
1229-1244
0.001
5
6mer
21304-21326
0.001
2
6mer
2067-2091
0.001
0
6mer
2157-2171
0.001
2
6mer
2166-2193
0.000
3
AC002306.1
hsa-miR-150-5p
0.842
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000559614
Biotype: antisense
Gene id: ENSG00000259242
Gene Name: AC002306.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
284-299
0.018
Not Conserved
7mer
54-67
0.012
1
7mer
382-392
0.005
0
6mer
545-560
0.004
1
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