LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
LINC00152
hsa-miR-150-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000437561
Biotype: lincRNA
Gene id: ENSG00000222041
Gene Name: LINC00152
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
245-260
0.039
7
XLOC_008482
hsa-miR-150-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018200
Biotype: transcript isomorph
Gene id: XLOC_008482
Gene Name: XLOC_008482
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
413-437
0.032
1
6mer
590-607
0.008
2
RP11-1086F11.1
hsa-miR-150-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000417786
Biotype: sense_intronic
Gene id: ENSG00000225300
Gene Name: RP11-1086F11.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1649-1667
0.012
1
8mer
1678-1703
0.010
Not Conserved
6mer
347-367
0.010
1
6mer
92-112
0.006
0
6mer
1151-1171
0.002
Not Conserved
CTD-2012K14.6
hsa-miR-150-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565929
Biotype: lincRNA
Gene id: ENSG00000261386
Gene Name: CTD-2012K14.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
100-127
0.016
3
9mer
75-88
0.014
2
7mer
383-395
0.009
1
LINC01038
hsa-miR-150-5p
0.851
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000457858
Biotype: lincRNA
Gene id: ENSG00000229011
Gene Name: LINC01038
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
138-158
0.039
9
RP11-83A24.2
hsa-miR-150-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000610159
Biotype: antisense
Gene id: ENSG00000273247
Gene Name: RP11-83A24.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3993-4008
0.008
1
7mer
231-241
0.008
1
7mer
673-683
0.005
1
7mer
1168-1190
0.005
0
7mer
3040-3062
0.003
1
7mer
3189-3199
0.003
1
6mer
4768-4792
0.002
1
7mer
2712-2722
0.002
1
7mer
2548-2563
0.002
Not Conserved
6mer
1150-1176
0.001
1
BSN-AS2
hsa-miR-150-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000421598
Biotype: lincRNA
Gene id: ENSG00000226913
Gene Name: BSN-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2205-2230
0.019
1
8mer
1068-1084
0.012
1
7mer
1905-1932
0.005
1
6mer
1468-1494
0.002
1
6mer
1740-1766
0.002
1
RP5-1198O20.4
hsa-miR-150-5p
0.850
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000447959
Biotype: lincRNA
Gene id: ENSG00000230615
Gene Name: RP5-1198O20.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
438-463
0.039
1
RP11-421L21.3
hsa-miR-150-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000449473
Biotype: antisense
Gene id: ENSG00000233184
Gene Name: RP11-421L21.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
964-989
0.039
3
RP11-321G12.1
hsa-miR-150-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559379
Biotype: lincRNA
Gene id: ENSG00000259459
Gene Name: RP11-321G12.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
153-171
0.034
1
6mer
355-372
0.005
3
RP1-15D23.2
hsa-miR-150-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000432694
Biotype: lincRNA
Gene id: ENSG00000224228
Gene Name: RP1-15D23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
496-509
0.034
1
6mer
54-72
0.005
0
LINC00639
hsa-miR-150-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: NR_039982.1
Biotype: lincRNA
Gene id: NR_039982.1 (gene)
Gene Name: LINC00639
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
118-143
0.027
0
7mer
1279-1299
0.004
1
7mer
3470-3493
0.004
0
6mer
1021-1042
0.001
0
6mer
2594-2619
0.001
0
6mer
2355-2372
0.001
0
6mer
2536-2560
0.000
0
6mer
2799-2822
0.000
0
6mer
2495-2512
0.000
0
AC011284.3
hsa-miR-150-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000427920
Biotype: antisense
Gene id: ENSG00000236510
Gene Name: AC011284.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
779-796
0.009
0
7mer
722-739
0.007
0
7mer
552-575
0.006
0
7mer
495-512
0.006
0
7mer
390-407
0.005
0
7mer
665-682
0.004
0
6mer
225-246
0.003
2
RP11-325N19.3
hsa-miR-150-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000499797
Biotype: lincRNA
Gene id: ENSG00000246863
Gene Name: RP11-325N19.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
343-360
0.017
2
7mer
816-838
0.010
0
7mer
390-413
0.007
1
7mer
1011-1022
0.005
1
FTX
hsa-miR-150-5p
0.849
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000603672
Biotype: lincRNA
Gene id: ENSG00000230590
Gene Name: FTX
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
965-984
0.035
2
7mer
355-365
0.004
0
PDXDC2P
hsa-miR-150-5p
0.848
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000531894
Biotype: processed_transcript
Gene id: ENSG00000196696
Gene Name: PDXDC2P
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3249-3268
0.027
1
6mer
3716-3733
0.004
3
7mer
2716-2736
0.003
5
6mer
1182-1207
0.001
Not Conserved
6mer
1603-1627
0.001
0
6mer
2753-2775
0.001
4
6mer
2358-2380
0.001
0
RP11-598F7.4
hsa-miR-150-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000508953
Biotype: antisense
Gene id: ENSG00000249695
Gene Name: RP11-598F7.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4699-4724
0.018
1
7mer
558-577
0.005
1
6mer
224-242
0.004
1
8mer
3477-3496
0.003
0
6mer
613-639
0.002
0
8mer+mismatch
792-811
0.002
3
6mer
1064-1075
0.001
0
6mer
1271-1286
0.001
0
6mer
1794-1813
0.001
2
6mer
1731-1756
0.000
1
6mer
1769-1791
0.000
1
XLOC_010920
hsa-miR-150-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022618
Biotype: transcript isomorph
Gene id: XLOC_010920
Gene Name: XLOC_010920
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
556-573
0.025
3
7mer
567-593
0.005
1
6mer
2071-2087
0.002
1
7mer
1813-1838
0.002
0
6mer
651-668
0.002
2
7mer
974-984
0.002
Not Conserved
XLOC_012583
hsa-miR-150-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025255
Biotype: transcript isomorph
Gene id: XLOC_012583
Gene Name: XLOC_012583
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
401-421
0.019
1
7mer
1087-1092
0.006
1
7mer
2506-2530
0.005
1
6mer
526-548
0.002
1
7mer
1031-1057
0.002
0
8mer
2108-2135
0.002
Not Conserved
6mer
3441-3468
0.001
2
6mer
799-822
0.001
1
6mer
3133-3159
0.001
1
MIR137HG
hsa-miR-150-5p
0.847
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000424528
Biotype: lincRNA
Gene id: ENSG00000225206
Gene Name: MIR137HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
251-278
0.030
1
7mer
2053-2074
0.009
3
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