LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
AC006482.1
hsa-miR-150-5p
0.857
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000448898
Biotype: lincRNA
Gene id: ENSG00000228675
Gene Name: AC006482.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
187-210
0.040
0
CTD-2396E7.11
hsa-miR-150-5p
0.856
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000615487
Biotype: antisense
Gene id: ENSG00000275234
Gene Name: CTD-2396E7.11
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
495-511
0.040
2
RP1-240K6.3
hsa-miR-150-5p
0.856
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000561382
Biotype: retained_intron
Gene id: ENSG00000251393
Gene Name: RP1-240K6.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
64-90
0.019
1
7mer
468-485
0.017
Not Conserved
6mer
59-78
0.004
1
RP11-398K22.12
hsa-miR-150-5p
0.856
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000441363
Biotype: antisense
Gene id: ENSG00000229852
Gene Name: RP11-398K22.12
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
69-91
0.023
0
6mer
114-129
0.006
1
7mer
1971-1981
0.005
0
6mer
208-232
0.004
1
6mer
432-452
0.002
1
RP11-218F4.1
hsa-miR-150-5p
0.856
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000567574
Biotype: lincRNA
Gene id: ENSG00000260019
Gene Name: RP11-218F4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
310-331
0.040
3
XLOC_010879
hsa-miR-150-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022559
Biotype: transcript isomorph
Gene id: XLOC_010879
Gene Name: XLOC_010879
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
K562 Blood Cancer/Malignant
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
484-505
0.022
0
7mer
183-208
0.017
3
CTD-2291D10.4
hsa-miR-150-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594318
Biotype: lincRNA
Gene id: ENSG00000267886
Gene Name: CTD-2291D10.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
122-144
0.040
0
RP11-252A24.3
hsa-miR-150-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563701
Biotype: lincRNA
Gene id: ENSG00000261079
Gene Name: RP11-252A24.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2240-2265
0.040
0
CTD-3018O17.3
hsa-miR-150-5p
0.855
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000596746
Biotype: lincRNA
Gene id: ENSG00000269834
Gene Name: CTD-3018O17.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
436-450
0.040
1
DLEU1
hsa-miR-150-5p
0.854
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: NR_002605.2
Biotype: sense
Gene id: NR_002605.2 (gene)
Gene Name: DLEU1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
439-464
0.018
3
8mer
1087-1097
0.011
1
7mer
862-881
0.007
1
8mer
1204-1229
0.004
0
RP11-421L21.3
hsa-miR-150-5p
0.854
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000451213
Biotype: retained_intron
Gene id: ENSG00000233184
Gene Name: RP11-421L21.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1204-1229
0.040
3
XLOC_007508
hsa-miR-150-5p
0.853
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016123
Biotype: transcript isomorph
Gene id: XLOC_007508
Gene Name: XLOC_007508
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
167-193
0.036
7
6mer
837-848
0.004
1
RP11-132N15.3
hsa-miR-150-5p
0.853
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000446091
Biotype: lincRNA
Gene id: ENSG00000224187
Gene Name: RP11-132N15.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
160-181
0.020
1
7mer
450-465
0.015
5
6mer
47-63
0.004
1
FAM138A
hsa-miR-150-5p
0.853
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000417324
Biotype: lincRNA
Gene id: ENSG00000237613
Gene Name: FAM138A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
904-926
0.035
4
6mer
141-161
0.003
Not Conserved
6mer
269-294
0.001
Not Conserved
AC003665.1
hsa-miR-150-5p
0.853
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000585280
Biotype: antisense
Gene id: ENSG00000234494
Gene Name: AC003665.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
60-73
0.039
1
RP11-495P10.6
hsa-miR-150-5p
0.853
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000428035
Biotype: lincRNA
Gene id: ENSG00000234283
Gene Name: RP11-495P10.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
194-215
0.032
0
6mer
132-151
0.007
1
XLOC_009837
hsa-miR-150-5p
0.852
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020519
Biotype: transcript isomorph
Gene id: XLOC_009837
Gene Name: XLOC_009837
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Breast Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
298-313
0.039
1
RP11-700H6.2
hsa-miR-150-5p
0.852
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000512717
Biotype: lincRNA
Gene id: ENSG00000251665
Gene Name: RP11-700H6.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
390-412
0.034
1
6mer
276-298
0.006
2
XLOC_002585
hsa-miR-150-5p
0.852
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006792
Biotype: transcript isomorph
Gene id: XLOC_002585
Gene Name: XLOC_002585
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2813-2830
0.028
2
7mer
733-743
0.006
1
6mer
364-381
0.003
1
7mer
2337-2351
0.002
0
RP11-844P9.2
hsa-miR-150-5p
0.852
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000510850
Biotype: retained_intron
Gene id: ENSG00000248596
Gene Name: RP11-844P9.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
32-57
0.022
1
7mer
44-58
0.012
0
6mer
303-325
0.005
0
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