LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-449D8.5
hsa-miR-150-5p
0.869
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000577354
Biotype: lincRNA
Gene id: ENSG00000266573
Gene Name: RP11-449D8.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
69-85
0.023
4
7mer
375-380
0.015
1
7mer
138-153
0.004
Not Conserved
RP11-727A23.5
hsa-miR-150-5p
0.869
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000602381
Biotype: lincRNA
Gene id: ENSG00000247137
Gene Name: RP11-727A23.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
214-232
0.042
11
XLOC_009272
hsa-miR-150-5p
0.869
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019459
Biotype: transcript isomorph
Gene id: XLOC_009272
Gene Name: XLOC_009272
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
542-560
0.024
1
7mer
118-137
0.013
1
6mer
1045-1049
0.004
0
LOC440910
hsa-miR-150-5p
0.868
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_030728.1
Biotype: sense
Gene id: NR_030728.1 (gene)
Gene Name: LOC440910
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
557-571
0.025
2
8mer
1648-1658
0.010
Not Conserved
7mer
846-865
0.002
Not Conserved
6mer
1083-1104
0.002
Not Conserved
6mer
1424-1448
0.001
Not Conserved
RP11-112L6.3
hsa-miR-150-5p
0.868
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000435301
Biotype: lincRNA
Gene id: ENSG00000237595
Gene Name: RP11-112L6.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
471-493
0.025
1
8mer
51-74
0.010
0
7mer
82-92
0.006
0
PDXDC2P
hsa-miR-150-5p
0.868
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000530079
Biotype: processed_transcript
Gene id: ENSG00000196696
Gene Name: PDXDC2P
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1809-1828
0.027
1
6mer
2276-2293
0.004
3
6mer
2468-2491
0.004
5
7mer
1276-1296
0.003
5
6mer
918-940
0.002
0
6mer
1313-1335
0.001
4
RP11-569G13.2
hsa-miR-150-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000432783
Biotype: lincRNA
Gene id: ENSG00000237212
Gene Name: RP11-569G13.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
50-68
0.039
0
6mer
550-570
0.001
0
6mer
635-653
0.001
Not Conserved
PROX1-AS1
hsa-miR-150-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000609140
Biotype: antisense
Gene id: ENSG00000230461
Gene Name: PROX1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
634-654
0.035
2
6mer
309-324
0.006
6
AC010091.1
hsa-miR-150-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000455420
Biotype: lincRNA
Gene id: ENSG00000233491
Gene Name: AC010091.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1267-1289
0.020
1
8mer
1064-1081
0.009
1
6mer
3936-3955
0.003
0
6mer
4066-4080
0.003
1
6mer
3774-3796
0.003
0
6mer
2283-2298
0.003
1
XLOC_013657
hsa-miR-150-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028007
Biotype: transcript isomorph
Gene id: XLOC_013657
Gene Name: XLOC_013657
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
500-521
0.027
0
7mer
2770-2793
0.015
0
NR2F1-AS1
hsa-miR-150-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607831
Biotype: antisense
Gene id: ENSG00000237187
Gene Name: NR2F1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
726-739
0.031
3
8mer
571-584
0.009
1
6mer
1830-1854
0.001
0
LINC01013
hsa-miR-150-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000436112
Biotype: lincRNA
Gene id: ENSG00000228495
Gene Name: LINC01013
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
371-396
0.036
4
6mer
94-115
0.005
0
LINC01184
hsa-miR-150-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000501702
Biotype: lincRNA
Gene id: ENSG00000245937
Gene Name: LINC01184
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1774-1789
0.031
1
7mer
1722-1743
0.004
2
7mer
1756-1781
0.004
0
6mer
1684-1699
0.001
1
6mer
1557-1580
0.001
0
RP5-1069C8.2
hsa-miR-150-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: NR_109868.1
Biotype: lincRNA
Gene id: NR_109868.1 (gene)
Gene Name: RP5-1069C8.2
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
498-519
0.026
0
7mer
2462-2485
0.015
0
RP5-1069C8.2
hsa-miR-150-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000456265
Biotype: lincRNA
Gene id: ENSG00000233048
Gene Name: RP5-1069C8.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
500-521
0.026
0
7mer
2464-2487
0.015
0
LINC01184
hsa-miR-150-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_015360.1
Biotype: lincRNA
Gene id: NR_015360.1 (gene)
Gene Name: LINC01184
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1751-1766
0.031
1
7mer
1699-1720
0.004
2
7mer
1733-1758
0.004
0
6mer
1661-1676
0.001
1
6mer
1534-1557
0.001
0
TMCC1-AS1
hsa-miR-150-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000605830
Biotype: antisense
Gene id: ENSG00000271270
Gene Name: TMCC1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2207-2224
0.020
0
8mer
1033-1058
0.015
0
6mer
269-295
0.003
0
6mer
2446-2461
0.002
0
RP11-850F7.7
hsa-miR-150-5p
0.865
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000552524
Biotype: lincRNA
Gene id: ENSG00000257634
Gene Name: RP11-850F7.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
129-155
0.035
1
7mer
585-597
0.006
Not Conserved
RP11-511B23.1
hsa-miR-150-5p
0.865
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000552353
Biotype: lincRNA
Gene id: ENSG00000257345
Gene Name: RP11-511B23.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
238-253
0.041
1
MEIS1-AS3
hsa-miR-150-5p
0.863
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000454167
Biotype: antisense
Gene id: ENSG00000226819
Gene Name: MEIS1-AS3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
380-398
0.038
3
6mer
254-278
0.003
1
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