LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_001882
hsa-miR-150-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004043
Biotype: transcript isomorph
Gene id: XLOC_001882
Gene Name: XLOC_001882
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
611-636
0.136
8
6mer
9-29
0.002
1
RP11-340I6.1
hsa-miR-150-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000451103
Biotype: lincRNA
Gene id: ENSG00000234387
Gene Name: RP11-340I6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
441-464
0.137
1
XLOC_009043
hsa-miR-150-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019211
Biotype: transcript isomorph
Gene id: XLOC_009043
Gene Name: XLOC_009043
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
108-135
0.134
0
CTB-89H12.4
hsa-miR-150-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000499521
Biotype: retained_intron
Gene id: ENSG00000230551
Gene Name: CTB-89H12.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
101-127
0.106
9
6mer
21-35
0.009
10
6mer
1718-1722
0.005
10
7mer
6595-6605
0.003
1
7mer
3850-3866
0.002
1
7mer
6855-6880
0.002
0
8mer
6429-6452
0.002
0
6mer
5688-5708
0.001
1
7mer
6582-6606
0.001
0
7mer
3774-3784
0.001
0
6mer
6823-6840
0.001
1
CTA-221G9.11
hsa-miR-150-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623422
Biotype: lincRNA
Gene id: ENSG00000279298
Gene Name: CTA-221G9.11
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
228-239
0.058
0
7mer
149-159
0.029
0
7mer
843-853
0.029
0
6mer
677-693
0.015
0
XLOC_000651
hsa-miR-150-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001364
Biotype: transcript isomorph
Gene id: XLOC_000651
Gene Name: XLOC_000651
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
40-59
0.129
0
XLOC_002995
hsa-miR-150-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006375
Biotype: transcript isomorph
Gene id: XLOC_002995
Gene Name: XLOC_002995
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1042-1062
0.045
1
7mer
955-980
0.031
1
7mer
635-645
0.022
1
6mer
997-1012
0.013
1
7mer
694-719
0.012
0
AC114776.3
hsa-miR-150-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000414159
Biotype: lincRNA
Gene id: ENSG00000235881
Gene Name: AC114776.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4227-4242
0.048
1
7mer
906-918
0.028
1
7mer
1055-1065
0.017
1
7mer
2772-2793
0.016
1
7mer
48-58
0.011
0
XLOC_002749
hsa-miR-150-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006148
Biotype: transcript isomorph
Gene id: XLOC_002749
Gene Name: XLOC_002749
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Breast Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
28-45
0.116
7
6mer
1362-1383
0.002
3
MIR4534
hsa-miR-150-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623111
Biotype: sense_overlapping
Gene id: ENSG00000279010
Gene Name: MIR4534
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
13157-13167
0.013
Not Conserved
7mer
11331-11357
0.009
1
7mer
17309-17333
0.007
1
7mer
33216-33228
0.004
1
8mer
26942-26968
0.003
1
7mer
24633-24655
0.003
1
7mer
13619-13642
0.003
Not Conserved
7mer
34295-34321
0.003
2
8mer
36952-36976
0.002
1
7mer
21695-21705
0.002
1
6mer
19299-19320
0.002
6
7mer
47314-47339
0.002
0
6mer
20747-20769
0.002
7
7mer
41716-41721
0.002
1
7mer
42668-42693
0.002
1
6mer
4787-4803
0.002
7
7mer
27642-27652
0.002
0
7mer
39725-39735
0.002
0
7mer
40052-40062
0.002
1
6mer
19637-19651
0.002
8
7mer
2614-2624
0.002
0
7mer
2295-2318
0.002
0
6mer
46690-46705
0.002
5
6mer
18765-18784
0.002
9
7mer
47038-47058
0.002
Not Conserved
6mer
24127-24151
0.002
4
6mer
30212-30226
0.002
1
7mer
45378-45401
0.001
0
7mer
28561-28578
0.001
1
6mer
25347-25360
0.001
7
6mer
45170-45190
0.001
0
7mer
42249-42270
0.001
1
6mer
12746-12769
0.001
Not Conserved
6mer
40994-41013
0.001
2
7mer
28689-28714
0.001
1
6mer
23660-23677
0.001
Not Conserved
7mer
39851-39876
0.001
0
7mer
6940-6950
0.001
1
7mer
2733-2758
0.001
0
6mer
18326-18343
0.001
1
6mer
15796-15815
0.001
1
6mer
42195-42221
0.001
2
6mer
40387-40412
0.001
1
6mer
25841-25862
0.001
3
6mer
50451-50475
0.001
0
6mer
6807-6834
0.001
0
6mer
33855-33875
0.001
1
6mer
15665-15680
0.001
1
6mer
18842-18863
0.001
3
7mer
23811-23836
0.001
0
6mer
36401-36418
0.001
0
6mer
21831-21853
0.001
0
6mer
48203-48217
0.001
2
6mer
51816-51841
0.001
0
6mer
26712-26731
0.001
0
6mer
36054-36076
0.001
0
8mer+mismatch
52720-52741
0.001
1
6mer
48787-48812
0.000
1
6mer
49677-49696
0.000
1
6mer
36226-36248
0.000
0
6mer
18378-18399
0.000
1
6mer
48299-48318
0.000
2
6mer
36539-36560
0.000
1
6mer
23763-23782
0.000
Not Conserved
6mer
23727-23745
0.000
Not Conserved
6mer
50465-50487
0.000
Not Conserved
6mer
23702-23715
0.000
Not Conserved
6mer
36081-36097
0.000
2
6mer
36242-36262
0.000
1
CTC-513N18.7
hsa-miR-150-5p
0.998
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000595094
Biotype: lincRNA
Gene id: ENSG00000269110
Gene Name: CTC-513N18.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
425-452
0.082
1
8mer
121-146
0.018
0
8mer
152-160
0.008
0
6mer
57-72
0.008
1
CTC-459F4.3
hsa-miR-150-5p
0.998
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000585827
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
201-225
0.111
0
6mer
340-355
0.003
Not Conserved
RP11-6N13.4
hsa-miR-150-5p
0.998
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000523745
Biotype: lincRNA
Gene id: ENSG00000253776
Gene Name: RP11-6N13.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
329-351
0.113
1
CTC-459F4.3
hsa-miR-150-5p
0.998
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588636
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
237-261
0.109
0
6mer
376-391
0.004
Not Conserved
RP11-706O15.1
hsa-miR-150-5p
0.998
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000486571
Biotype: lincRNA
Gene id: ENSG00000205664
Gene Name: RP11-706O15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
197-217
0.105
1
6mer
637-655
0.005
0
RP3-323A16.1
hsa-miR-150-5p
0.997
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
631-655
0.006
1
7mer
2513-2527
0.006
1
7mer
39789-39811
0.005
1
7mer
7245-7263
0.005
0
7mer
26176-26194
0.004
0
8mer
1816-1831
0.004
Not Conserved
7mer
36614-36624
0.003
0
7mer
36401-36419
0.003
2
7mer
1503-1515
0.003
1
7mer
16480-16504
0.003
1
7mer
3416-3434
0.003
1
7mer
28239-28264
0.002
1
7mer
16526-16549
0.002
1
7mer
12057-12078
0.002
0
6mer
574-598
0.002
1
7mer
35034-35052
0.002
1
6mer
16467-16488
0.002
1
7mer
10850-10860
0.002
1
7mer
12314-12330
0.002
0
7mer
31202-31219
0.002
0
7mer
48085-48107
0.002
1
7mer
3019-3029
0.002
1
7mer
39059-39084
0.002
0
6mer
21156-21170
0.002
0
7mer
18219-18244
0.002
0
7mer
36730-36752
0.002
0
7mer
28381-28406
0.002
1
7mer
35251-35261
0.002
0
6mer
52050-52075
0.002
1
7mer
32416-32439
0.002
0
7mer
27996-28019
0.002
1
6mer
6231-6257
0.001
0
6mer
41599-41625
0.001
1
6mer
42404-42424
0.001
1
6mer
42872-42883
0.001
0
6mer
24371-24382
0.001
1
6mer
13979-13991
0.001
1
6mer
9947-9962
0.001
1
6mer
38122-38137
0.001
1
6mer
49523-49541
0.001
2
6mer
15413-15435
0.001
0
8mer
52329-52348
0.001
1
6mer
27861-27886
0.001
0
6mer
26940-26955
0.001
1
7mer
38887-38912
0.001
0
6mer
31371-31384
0.001
0
6mer
49805-49830
0.001
2
6mer
38813-38833
0.001
0
6mer
18353-18378
0.001
0
6mer
50324-50345
0.001
0
6mer
39230-39250
0.001
2
6mer
50452-50476
0.001
1
AP001042.1
hsa-miR-150-5p
0.997
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000416842
Biotype: lincRNA
Gene id: ENSG00000229986
Gene Name: AP001042.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Lymph Node Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
285-306
0.107
2
XLOC_004451
hsa-miR-150-5p
0.996
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009438
Biotype: transcript isomorph
Gene id: XLOC_004451
Gene Name: XLOC_004451
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
642-655
0.065
1
7mer
900-911
0.032
1
6mer
267-279
0.007
1
RP11-212D3.4
hsa-miR-150-5p
0.996
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000413763
Biotype: lincRNA
Gene id: ENSG00000226854
Gene Name: RP11-212D3.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
406-425
0.097
0
6mer
543-560
0.006
0
RP11-131K5.2
hsa-miR-150-5p
0.996
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000580134
Biotype: lincRNA
Gene id: ENSG00000265494
Gene Name: RP11-131K5.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1739-1761
0.046
1
7mer
1580-1605
0.042
1
6mer
1753-1779
0.014
1
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