LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
AC027763.2
hsa-miR-150-5p
0.875
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000399540
Biotype: antisense
Gene id: ENSG00000215067
Gene Name: AC027763.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
464-490
0.015
2
7mer
233-246
0.014
0
8mer
478-498
0.007
4
7mer
75-85
0.005
0
6mer
654-669
0.002
5
AC026904.1
hsa-miR-150-5p
0.875
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000430626
Biotype: lincRNA
Gene id: ENSG00000233858
Gene Name: AC026904.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2346-2372
0.024
0
8mer
367-387
0.008
0
7mer
1735-1761
0.005
2
7mer
1031-1050
0.003
1
6mer
862-881
0.002
2
XLOC_012150
hsa-miR-150-5p
0.875
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025337
Biotype: transcript isomorph
Gene id: XLOC_012150
Gene Name: XLOC_012150
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
678-702
0.023
0
7mer
323-345
0.012
0
7mer
309-332
0.008
0
RP11-421L21.3
hsa-miR-150-5p
0.874
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000446527
Biotype: antisense
Gene id: ENSG00000233184
Gene Name: RP11-421L21.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
808-833
0.042
3
MIR137HG
hsa-miR-150-5p
0.874
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_046105.1
Biotype: lincRNA
Gene id: NR_046105.1 (gene)
Gene Name: MIR137HG
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
251-278
0.033
1
7mer
2053-2074
0.009
3
U95743.1
hsa-miR-150-5p
0.874
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000573369
Biotype: lincRNA
Gene id: ENSG00000262267
Gene Name: U95743.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
313-336
0.028
1
6mer
613-635
0.008
10
6mer
935-953
0.004
0
6mer
356-370
0.003
1
PROX1-AS1
hsa-miR-150-5p
0.873
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000608328
Biotype: antisense
Gene id: ENSG00000230461
Gene Name: PROX1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
738-758
0.036
2
6mer
413-428
0.006
6
RP11-14J7.6
hsa-miR-150-5p
0.873
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553604
Biotype: antisense
Gene id: ENSG00000258573
Gene Name: RP11-14J7.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
182-208
0.042
3
STARD7-AS1
hsa-miR-150-5p
0.873
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000432267
Biotype: retained_intron
Gene id: ENSG00000204685
Gene Name: STARD7-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
117-141
0.020
0
7mer
1264-1287
0.011
1
7mer
1637-1654
0.011
1
LINC00977
hsa-miR-150-5p
0.872
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_033916.1
Biotype: lincRNA
Gene id: NR_033916.1 (gene)
Gene Name: LINC00977
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
846-869
0.037
6
6mer
826-851
0.005
6
LINC00977
hsa-miR-150-5p
0.872
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000509893
Biotype: lincRNA
Gene id: ENSG00000250400
Gene Name: LINC00977
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
846-869
0.037
6
6mer
826-851
0.005
6
RP11-173D14.3
hsa-miR-150-5p
0.872
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000430931
Biotype: lincRNA
Gene id: ENSG00000229495
Gene Name: RP11-173D14.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2029-2054
0.024
1
7mer
107-125
0.018
1
XLOC_011775
hsa-miR-150-5p
0.872
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024452
Biotype: transcript isomorph
Gene id: XLOC_011775
Gene Name: XLOC_011775
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
69-85
0.039
0
6mer
284-308
0.003
1
RAMP2-AS1
hsa-miR-150-5p
0.871
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000589716
Biotype: lincRNA
Gene id: ENSG00000197291
Gene Name: RAMP2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1492-1507
0.018
1
7mer
350-360
0.007
1
7mer
1343-1369
0.007
1
7mer
641-668
0.004
0
6mer
74-89
0.004
1
6mer
577-591
0.002
1
AC008271.1
hsa-miR-150-5p
0.871
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000492352
Biotype: lincRNA
Gene id: ENSG00000231031
Gene Name: AC008271.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1802-1819
0.029
0
7mer
15-40
0.005
0
6mer
1008-1031
0.002
0
6mer
1087-1109
0.002
2
6mer
808-831
0.002
1
6mer
1244-1267
0.002
1
XLOC_001556
hsa-miR-150-5p
0.871
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004835
Biotype: transcript isomorph
Gene id: XLOC_001556
Gene Name: XLOC_001556
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
879-896
0.039
2
6mer
36-58
0.003
1
RP4-671O14.6
hsa-miR-150-5p
0.870
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624919
Biotype: sense_overlapping
Gene id: ENSG00000280434
Gene Name: RP4-671O14.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
13047-13067
0.016
1
8mer
3158-3176
0.005
1
7mer
2044-2066
0.004
0
7mer
11045-11070
0.003
1
7mer
5186-5196
0.002
1
7mer
11411-11421
0.002
0
6mer
1291-1316
0.002
1
6mer
8134-8156
0.001
2
7mer
7813-7837
0.001
1
7mer
2061-2084
0.001
0
6mer
1636-1654
0.001
0
6mer
7734-7758
0.001
1
6mer
7187-7213
0.001
1
6mer
11221-11236
0.001
Not Conserved
6mer
7215-7240
0.000
0
CTD-2012K14.6
hsa-miR-150-5p
0.870
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000605277
Biotype: lincRNA
Gene id: ENSG00000261386
Gene Name: CTD-2012K14.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
80-93
0.019
2
7mer
105-132
0.019
3
6mer
183-205
0.004
3
RP11-977G19.14
hsa-miR-150-5p
0.870
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000546464
Biotype: antisense
Gene id: ENSG00000258260
Gene Name: RP11-977G19.14
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
320-330
0.042
1
MIATNB
hsa-miR-150-5p
0.870
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000450963
Biotype: lincRNA
Gene id: ENSG00000244625
Gene Name: MIATNB
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
619-638
0.015
0
7mer
480-502
0.014
1
7mer
208-227
0.005
Not Conserved
6mer
357-383
0.004
1
8mer+mismatch
443-464
0.003
1
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