LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
CAPN10-AS1
hsa-miR-150-5p
0.897
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_103792.1
Biotype: lincRNA
Gene id: NR_103792.1 (gene)
Gene Name: CAPN10-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3530-3549
0.023
2
7mer
3274-3292
0.014
1
7mer
2293-2318
0.005
1
6mer
3444-3467
0.003
1
7mer
1674-1684
0.002
0
NR2F1-AS1
hsa-miR-150-5p
0.897
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607797
Biotype: antisense
Gene id: ENSG00000237187
Gene Name: NR2F1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2693-2706
0.035
3
8mer
2538-2551
0.007
1
7mer
1776-1803
0.005
0
TPTEP1
hsa-miR-150-5p
0.896
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000588424
Biotype: lincRNA
Gene id: ENSG00000100181
Gene Name: TPTEP1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
463-479
0.046
0
LINC01141
hsa-miR-150-5p
0.896
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000426428
Biotype: lincRNA
Gene id: ENSG00000236963
Gene Name: LINC01141
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
926-949
0.036
3
7mer
1228-1251
0.003
1
6mer
452-471
0.003
1
6mer
1751-1773
0.002
0
6mer
1625-1651
0.001
2
6mer
360-376
0.001
0
RP11-661A12.12
hsa-miR-150-5p
0.895
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000524808
Biotype: antisense
Gene id: ENSG00000254812
Gene Name: RP11-661A12.12
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2-27
0.016
0
7mer
113-123
0.014
0
6mer
364-381
0.011
1
6mer
322-338
0.005
0
FAM66C
hsa-miR-150-5p
0.895
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000420514
Biotype: antisense
Gene id: ENSG00000226711
Gene Name: FAM66C
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
36-49
0.046
0
DOCK9-AS2
hsa-miR-150-5p
0.895
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000562781
Biotype: antisense
Gene id: ENSG00000260992
Gene Name: DOCK9-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
48-73
0.046
1
CTBP1-AS2
hsa-miR-150-5p
0.895
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000505364
Biotype: antisense
Gene id: ENSG00000196810
Gene Name: CTBP1-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2342-2352
0.036
1
6mer
1920-1941
0.010
1
LINC00639
hsa-miR-150-5p
0.894
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557440
Biotype: lincRNA
Gene id: ENSG00000259070
Gene Name: LINC00639
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
99-124
0.029
0
7mer
556-582
0.007
1
7mer
1522-1542
0.003
1
6mer
2837-2862
0.002
0
6mer
2598-2615
0.001
0
6mer
2779-2803
0.001
0
6mer
1264-1285
0.001
0
6mer
3042-3065
0.001
0
6mer
2738-2755
0.001
0
RP11-443N24.4
hsa-miR-150-5p
0.894
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000544399
Biotype: lincRNA
Gene id: ENSG00000256256
Gene Name: RP11-443N24.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
300-326
0.043
2
6mer
368-392
0.002
0
XLOC_010534
hsa-miR-150-5p
0.893
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021940
Biotype: transcript isomorph
Gene id: XLOC_010534
Gene Name: XLOC_010534
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
91-117
0.045
1
SNHG14
hsa-miR-150-5p
0.893
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000553108
Biotype: antisense
Gene id: ENSG00000224078
Gene Name: SNHG14
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
600-624
0.017
0
8mer
470-496
0.017
0
7mer
353-373
0.008
0
6mer
1237-1264
0.002
1
RP11-1252I4.2
hsa-miR-150-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000511650
Biotype: lincRNA
Gene id: ENSG00000250101
Gene Name: RP11-1252I4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
195-221
0.036
1
6mer
208-229
0.009
1
FTX
hsa-miR-150-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000602776
Biotype: lincRNA
Gene id: ENSG00000230590
Gene Name: FTX
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
363-382
0.033
2
7mer
514-533
0.012
1
LINC00152
hsa-miR-150-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000423846
Biotype: lincRNA
Gene id: ENSG00000222041
Gene Name: LINC00152
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
245-262
0.045
7
GS1-124K5.3
hsa-miR-150-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000412091
Biotype: lincRNA
Gene id: ENSG00000223473
Gene Name: GS1-124K5.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
96-106
0.036
1
6mer
210-232
0.009
1
RP1-153G14.4
hsa-miR-150-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000607727
Biotype: lincRNA
Gene id: ENSG00000271755
Gene Name: RP1-153G14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2626-2651
0.043
0
6mer
2129-2151
0.002
1
LINC00639
hsa-miR-150-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553932
Biotype: lincRNA
Gene id: ENSG00000259070
Gene Name: LINC00639
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
118-143
0.027
0
7mer
508-534
0.007
1
7mer
3665-3688
0.004
0
7mer
1474-1494
0.003
1
6mer
2789-2814
0.001
0
6mer
1216-1237
0.001
0
6mer
2550-2567
0.001
0
6mer
2731-2755
0.000
0
6mer
2994-3017
0.000
0
6mer
2690-2707
0.000
0
LINC00152
hsa-miR-150-5p
0.889
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000419680
Biotype: lincRNA
Gene id: ENSG00000222041
Gene Name: LINC00152
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
463-480
0.045
7
CTC-505O3.2
hsa-miR-150-5p
0.889
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000512900
Biotype: lincRNA
Gene id: ENSG00000248709
Gene Name: CTC-505O3.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
356-365
0.045
1
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