LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-620J15.2
hsa-miR-150-5p
0.905
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000499481
Biotype: lincRNA
Gene id: ENSG00000245651
Gene Name: RP11-620J15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3410-3422
0.013
0
7mer
578-602
0.010
2
7mer
2954-2969
0.007
2
7mer
597-623
0.006
1
6mer
176-189
0.004
2
6mer
3074-3100
0.003
1
6mer
3348-3364
0.003
3
6mer
2893-2915
0.002
1
RP11-112L7.1
hsa-miR-150-5p
0.905
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000564402
Biotype: lincRNA
Gene id: ENSG00000260786
Gene Name: RP11-112L7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1174-1200
0.011
1
7mer
89-113
0.011
1
7mer
2555-2577
0.010
1
7mer
782-805
0.006
1
6mer
503-524
0.004
1
6mer
1302-1323
0.002
3
6mer
2591-2609
0.002
1
CTA-125H2.2
hsa-miR-150-5p
0.904
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000594856
Biotype: antisense
Gene id: ENSG00000231933
Gene Name: CTA-125H2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
595-610
0.047
5
RP11-506K6.4
hsa-miR-150-5p
0.903
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000607565
Biotype: antisense
Gene id: ENSG00000272320
Gene Name: RP11-506K6.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
31-37
0.042
1
7mer
168-186
0.005
1
XLOC_010271
hsa-miR-150-5p
0.903
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00021009
Biotype: transcript isomorph
Gene id: XLOC_010271
Gene Name: XLOC_010271
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Lymph Node Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
240-263
0.047
0
XLOC_010101
hsa-miR-150-5p
0.903
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020255
Biotype: transcript isomorph
Gene id: XLOC_010101
Gene Name: XLOC_010101
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
Fibroblasts Foreskin Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3409-3421
0.012
0
7mer
577-601
0.010
2
7mer
2953-2968
0.007
2
7mer
596-622
0.006
1
6mer
175-188
0.004
2
6mer
3073-3099
0.003
1
6mer
3347-3363
0.003
3
6mer
2892-2914
0.002
1
RNASEH2B-AS1
hsa-miR-150-5p
0.903
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000601286
Biotype: antisense
Gene id: ENSG00000233672
Gene Name: RNASEH2B-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
266-285
0.045
1
6mer
540-558
0.002
0
RP11-383H13.1
hsa-miR-150-5p
0.902
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522519
Biotype: antisense
Gene id: ENSG00000235531
Gene Name: RP11-383H13.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
354-378
0.044
2
6mer
181-204
0.003
3
XLOC_011494
hsa-miR-150-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00024132
Biotype: transcript isomorph
Gene id: XLOC_011494
Gene Name: XLOC_011494
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
362-378
0.047
1
RP11-340E6.1
hsa-miR-150-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000474979
Biotype: lincRNA
Gene id: ENSG00000242104
Gene Name: RP11-340E6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
931-953
0.047
6
CTC-260E6.6
hsa-miR-150-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000592022
Biotype: antisense
Gene id: ENSG00000267383
Gene Name: CTC-260E6.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
439-462
0.021
1
7mer
806-828
0.014
0
7mer
572-582
0.011
0
LINC00857
hsa-miR-150-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000422847
Biotype: lincRNA
Gene id: ENSG00000237523
Gene Name: LINC00857
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1693-1720
0.035
0
8mer
780-801
0.010
Not Conserved
6mer
1418-1441
0.002
Not Conserved
XLOC_009602
hsa-miR-150-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019802
Biotype: transcript isomorph
Gene id: XLOC_009602
Gene Name: XLOC_009602
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
539-561
0.027
0
8mer
573-597
0.013
0
6mer
243-262
0.004
2
6mer
1020-1042
0.003
0
SVIL-AS1
hsa-miR-150-5p
0.900
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000414457
Biotype: antisense
Gene id: ENSG00000224597
Gene Name: SVIL-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1203-1228
0.047
0
XLOC_005539
hsa-miR-150-5p
0.900
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012016
Biotype: transcript isomorph
Gene id: XLOC_005539
Gene Name: XLOC_005539
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
125-151
0.004
0
7mer
630-643
0.004
Not Conserved
6mer
266-286
0.004
Not Conserved
6mer
409-428
0.003
1
6mer
436-455
0.002
0
6mer
515-536
0.002
0
6mer
213-233
0.002
Not Conserved
6mer
383-402
0.002
0
6mer
1187-1209
0.002
1
6mer
730-753
0.002
0
6mer
1018-1034
0.002
Not Conserved
6mer
789-808
0.002
Not Conserved
6mer
700-724
0.001
Not Conserved
6mer
2420-2442
0.001
1
6mer
811-837
0.001
Not Conserved
6mer
539-563
0.001
Not Conserved
6mer
1347-1371
0.001
1
6mer
1772-1784
0.001
0
6mer
1250-1263
0.001
0
6mer
1266-1290
0.001
1
6mer
1878-1892
0.001
0
6mer
1293-1317
0.001
0
6mer
2150-2167
0.001
Not Conserved
6mer
1925-1946
0.001
0
6mer
2229-2250
0.001
0
6mer
1461-1480
0.001
0
6mer
2005-2029
0.001
0
6mer
2525-2549
0.001
1
6mer
2199-2221
0.001
0
6mer
1633-1650
0.001
0
6mer
2255-2277
0.001
0
6mer
2500-2522
0.001
0
6mer
1379-1398
0.001
0
6mer
1428-1451
0.000
Not Conserved
6mer
1639-1663
0.000
0
6mer
1949-1973
0.000
0
6mer
2280-2304
0.000
0
6mer
1485-1511
0.000
0
SEMA3F-AS1
hsa-miR-150-5p
0.900
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000437204
Biotype: antisense
Gene id: ENSG00000235016
Gene Name: SEMA3F-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
532-557
0.012
1
7mer
2589-2612
0.011
1
7mer
2712-2730
0.009
1
7mer
1042-1065
0.008
2
6mer
2386-2409
0.003
1
6mer
1349-1368
0.002
5
6mer
2281-2302
0.001
1
RP11-406H4.1
hsa-miR-150-5p
0.900
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547633
Biotype: antisense
Gene id: ENSG00000258039
Gene Name: RP11-406H4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
262-277
0.047
3
AC008132.15
hsa-miR-150-5p
0.900
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000611876
Biotype: lincRNA
Gene id: ENSG00000182824
Gene Name: AC008132.15
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1320-1344
0.047
0
XLOC_014244
hsa-miR-150-5p
0.900
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029809
Biotype: transcript isomorph
Gene id: XLOC_014244
Gene Name: XLOC_014244
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
888-910
0.024
1
7mer
1016-1026
0.012
1
7mer
1165-1191
0.010
0
LINC01456
hsa-miR-150-5p
0.898
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000453902
Biotype: lincRNA
Gene id: ENSG00000225882
Gene Name: LINC01456
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
218-244
0.046
3
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