LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_013243
hsa-miR-150-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027203
Biotype: transcript isomorph
Gene id: XLOC_013243
Gene Name: XLOC_013243
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
119-124
0.049
1
AC005154.6
hsa-miR-150-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000355837
Biotype: retained_intron
Gene id: ENSG00000196295
Gene Name: AC005154.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
8438-8463
0.013
1
7mer
10287-10310
0.005
1
6mer
676-698
0.004
3
6mer
14574-14592
0.004
1
7mer
12156-12166
0.004
0
6mer
14614-14628
0.003
Not Conserved
6mer
871-875
0.003
1
7mer
1928-1941
0.002
1
6mer
650-674
0.002
1
7mer
7203-7229
0.002
1
7mer
11873-11883
0.001
1
7mer
12027-12049
0.001
1
6mer
7307-7322
0.001
1
6mer
4720-4734
0.001
1
6mer
4644-4654
0.001
1
6mer
11995-12021
0.000
1
PCAT19
hsa-miR-150-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000595837
Biotype: lincRNA
Gene id: ENSG00000267107
Gene Name: PCAT19
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
25-35
0.038
1
6mer
784-807
0.011
1
TPTEP1
hsa-miR-150-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000415121
Biotype: lincRNA
Gene id: ENSG00000100181
Gene Name: TPTEP1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
584-599
0.040
1
7mer
652-675
0.009
0
XLOC_009323
hsa-miR-150-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019114
Biotype: transcript isomorph
Gene id: XLOC_009323
Gene Name: XLOC_009323
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
667-684
0.016
1
6mer
169-194
0.010
7
7mer
895-915
0.009
1
7mer
3553-3574
0.004
0
6mer
1138-1163
0.004
7
6mer
3509-3526
0.003
1
6mer
2398-2409
0.001
0
6mer
1876-1899
0.001
1
RP11-1012E15.2
hsa-miR-150-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000569625
Biotype: sense_intronic
Gene id: ENSG00000259868
Gene Name: RP11-1012E15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
147-165
0.049
1
RP5-1014D13.2
hsa-miR-150-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623726
Biotype: sense_overlapping
Gene id: ENSG00000279738
Gene Name: RP5-1014D13.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
676-694
0.010
0
7mer
18663-18683
0.006
1
6mer
1608-1625
0.003
8
7mer
6279-6289
0.003
0
7mer
8529-8552
0.003
0
7mer
9796-9806
0.002
1
7mer
11215-11225
0.002
0
7mer
5912-5922
0.002
0
7mer
3106-3116
0.002
0
7mer
11355-11380
0.002
Not Conserved
7mer
7187-7197
0.002
0
7mer
7519-7529
0.002
0
7mer
6593-6618
0.002
Not Conserved
7mer
17788-17804
0.002
0
7mer
6034-6057
0.002
0
6mer
17760-17786
0.001
1
7mer
6723-6750
0.001
Not Conserved
7mer
7641-7664
0.001
0
6mer
13689-13714
0.001
0
6mer
15455-15471
0.001
0
RP11-764K9.1
hsa-miR-150-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000417843
Biotype: lincRNA
Gene id: ENSG00000225411
Gene Name: RP11-764K9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
383-403
0.049
0
XLOC_002215
hsa-miR-150-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004341
Biotype: transcript isomorph
Gene id: XLOC_002215
Gene Name: XLOC_002215
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
HREpiC Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
257-281
0.024
0
6mer
216-242
0.011
1
6mer
113-117
0.006
0
8mer
155-179
0.006
Not Conserved
8mer
52-76
0.002
Not Conserved
RP4-734G22.3
hsa-miR-150-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000606802
Biotype: antisense
Gene id: ENSG00000272078
Gene Name: RP4-734G22.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
7328-7347
0.016
4
8mer
5442-5466
0.011
2
7mer
7806-7826
0.006
0
7mer
6118-6133
0.003
0
6mer
7856-7880
0.002
2
7mer
2118-2139
0.002
1
6mer
121-147
0.002
1
6mer
1036-1054
0.001
2
6mer
4550-4572
0.001
4
6mer
5031-5052
0.001
4
6mer
1558-1576
0.001
7
6mer
1066-1080
0.001
1
6mer
1624-1649
0.000
1
XLOC_002198
hsa-miR-150-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004327
Biotype: transcript isomorph
Gene id: XLOC_002198
Gene Name: XLOC_002198
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
193-210
0.044
1
6mer
35-52
0.004
1
RP11-160H12.2
hsa-miR-150-5p
0.908
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000533669
Biotype: antisense
Gene id: ENSG00000255311
Gene Name: RP11-160H12.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
29-56
0.046
1
6mer
415-429
0.002
1
RP1-29C18.10
hsa-miR-150-5p
0.908
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000391625
Biotype: lincRNA
Gene id: ENSG00000212939
Gene Name: RP1-29C18.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
829-855
0.022
0
7mer
3650-3660
0.007
0
6mer
187-207
0.003
0
6mer
2768-2786
0.002
0
6mer
232-252
0.002
Not Conserved
6mer
457-477
0.002
0
6mer
277-297
0.002
Not Conserved
6mer
322-342
0.002
Not Conserved
6mer
367-387
0.002
Not Conserved
6mer
502-520
0.002
0
6mer
412-432
0.002
Not Conserved
6mer
1915-1935
0.001
Not Conserved
6mer
1954-1971
0.001
0
RAMP2-AS1
hsa-miR-150-5p
0.908
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000592670
Biotype: lincRNA
Gene id: ENSG00000197291
Gene Name: RAMP2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2658-2673
0.020
1
7mer
2509-2535
0.008
1
7mer
350-360
0.005
1
7mer
641-668
0.004
0
6mer
74-89
0.004
1
6mer
577-591
0.002
1
7mer
1892-1902
0.002
1
6mer
2102-2123
0.001
1
6mer
2091-2111
0.001
2
6mer
1974-1988
0.001
1
RP11-357N13.2
hsa-miR-150-5p
0.908
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565641
Biotype: antisense
Gene id: ENSG00000260194
Gene Name: RP11-357N13.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
504-525
0.048
4
RP11-800A3.7
hsa-miR-150-5p
0.908
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000546324
Biotype: antisense
Gene id: ENSG00000257038
Gene Name: RP11-800A3.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1632-1653
0.045
6
6mer
1227-1250
0.003
6
AC023115.2
hsa-miR-150-5p
0.907
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000452716
Biotype: lincRNA
Gene id: ENSG00000235885
Gene Name: AC023115.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
873-890
0.048
4
CTD-3076O17.2
hsa-miR-150-5p
0.906
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559400
Biotype: antisense
Gene id: ENSG00000259219
Gene Name: CTD-3076O17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
111-128
0.033
0
7mer
1677-1702
0.005
0
7mer
747-772
0.005
0
7mer
1812-1837
0.004
1
6mer
1180-1200
0.001
0
RP11-1217F2.15
hsa-miR-150-5p
0.906
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000442649
Biotype: lincRNA
Gene id: ENSG00000234089
Gene Name: RP11-1217F2.15
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
376-399
0.048
1
LOC100652768
hsa-miR-150-5p
0.905
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: NR_045215.1
Biotype: antisense
Gene id: NR_045215.1 (gene)
Gene Name: LOC100652768
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
635-647
0.042
1
8mer
1146-1167
0.006
2
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