LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
RP11-164D18.2
hsa-miR-150-5p
0.918
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000443747
Biotype: lincRNA
Gene id: ENSG00000227282
Gene Name: RP11-164D18.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
17-30
0.035
1
8mer
433-456
0.015
0
XLOC_001200
hsa-miR-150-5p
0.918
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001819
Biotype: transcript isomorph
Gene id: XLOC_001200
Gene Name: XLOC_001200
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
763-790
0.033
0
7mer
1523-1548
0.004
0
7mer
2109-2132
0.003
1
7mer
2527-2550
0.003
1
6mer
5304-5329
0.002
2
6mer
3139-3164
0.001
1
6mer
6914-6932
0.001
0
7mer
1974-1987
0.001
0
6mer
1491-1506
0.000
0
RP11-219B17.1
hsa-miR-150-5p
0.918
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559902
Biotype: antisense
Gene id: ENSG00000245534
Gene Name: RP11-219B17.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
704-721
0.050
0
XLOC_002258
hsa-miR-150-5p
0.918
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004374
Biotype: transcript isomorph
Gene id: XLOC_002258
Gene Name: XLOC_002258
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
481-495
0.050
1
FLNB-AS1
hsa-miR-150-5p
0.916
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000488720
Biotype: antisense
Gene id: ENSG00000244161
Gene Name: FLNB-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
85-94
0.036
2
7mer
2683-2709
0.004
3
7mer
2894-2908
0.004
3
7mer
2620-2635
0.002
1
6mer
1188-1210
0.002
1
6mer
1951-1973
0.001
3
6mer
2471-2498
0.001
3
CYYR1-AS1
hsa-miR-150-5p
0.915
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000357401
Biotype: antisense
Gene id: ENSG00000197934
Gene Name: CYYR1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3166-3185
0.028
Not Conserved
7mer
2827-2844
0.017
1
6mer
2252-2270
0.003
2
6mer
1467-1485
0.001
Not Conserved
XLOC_004366
hsa-miR-150-5p
0.915
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009941
Biotype: transcript isomorph
Gene id: XLOC_004366
Gene Name: XLOC_004366
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
12839-12857
0.011
1
8mer
8548-8558
0.006
0
7mer
10387-10406
0.006
1
6mer
140-160
0.004
0
8mer
6434-6447
0.003
0
7mer
4860-4878
0.003
0
7mer
12988-12998
0.003
0
6mer
12715-12736
0.002
2
6mer
5953-5961
0.002
0
8mer
6380-6394
0.002
0
6mer
7612-7630
0.002
1
7mer
10097-10111
0.001
Not Conserved
7mer
6064-6087
0.001
Not Conserved
6mer
7941-7957
0.001
1
6mer
8660-8681
0.001
1
6mer
6842-6859
0.001
0
6mer
5071-5095
0.001
0
LINC01435
hsa-miR-150-5p
0.915
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000596263
Biotype: lincRNA
Gene id: ENSG00000229981
Gene Name: LINC01435
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
153-173
0.044
1
6mer
186-211
0.005
2
XLOC_011790
hsa-miR-150-5p
0.915
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024468
Biotype: transcript isomorph
Gene id: XLOC_011790
Gene Name: XLOC_011790
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
45-71
0.047
1
6mer
502-513
0.002
Not Conserved
LINC00457
hsa-miR-150-5p
0.914
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000440160
Biotype: lincRNA
Gene id: ENSG00000225179
Gene Name: LINC00457
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
221-245
0.049
4
AC012445.1
hsa-miR-150-5p
0.914
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000442831
Biotype: lincRNA
Gene id: ENSG00000229550
Gene Name: AC012445.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
91-115
0.049
1
RP11-33A14.1
hsa-miR-150-5p
0.913
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000411727
Biotype: lincRNA
Gene id: ENSG00000223930
Gene Name: RP11-33A14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
235-251
0.044
0
7mer
1487-1507
0.006
0
XLOC_010400
hsa-miR-150-5p
0.913
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021797
Biotype: transcript isomorph
Gene id: XLOC_010400
Gene Name: XLOC_010400
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
248-265
0.049
0
RP11-321G12.1
hsa-miR-150-5p
0.913
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559821
Biotype: lincRNA
Gene id: ENSG00000259459
Gene Name: RP11-321G12.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
59-77
0.036
1
7mer
1450-1468
0.006
0
7mer
1626-1642
0.005
Not Conserved
6mer
943-970
0.002
1
FAM138F
hsa-miR-150-5p
0.913
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586011
Biotype: lincRNA
Gene id: ENSG00000233630
Gene Name: FAM138F
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
947-969
0.045
3
6mer
82-102
0.003
Not Conserved
6mer
210-235
0.002
Not Conserved
AF131215.4
hsa-miR-150-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000531549
Biotype: sense_intronic
Gene id: ENSG00000254556
Gene Name: AF131215.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1387-1405
0.027
2
7mer
1374-1398
0.019
2
6mer
529-556
0.003
Not Conserved
RP11-43F13.3
hsa-miR-150-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000399869
Biotype: antisense
Gene id: ENSG00000215246
Gene Name: RP11-43F13.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1036-1057
0.040
0
6mer
3208-3229
0.004
1
6mer
3038-3051
0.004
1
6mer
1335-1356
0.001
0
LINC00160
hsa-miR-150-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000430635
Biotype: lincRNA
Gene id: ENSG00000230978
Gene Name: LINC00160
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
299-324
0.049
1
RP11-886D15.1
hsa-miR-150-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000536529
Biotype: lincRNA
Gene id: ENSG00000256422
Gene Name: RP11-886D15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Lung Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
112-138
0.049
0
AC008079.10
hsa-miR-150-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623543
Biotype: antisense
Gene id: ENSG00000280007
Gene Name: AC008079.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
17368-17374
0.013
1
7mer
685-702
0.004
0
7mer
16891-16901
0.003
1
7mer
18838-18862
0.003
1
7mer
12753-12778
0.003
1
7mer
4040-4059
0.002
1
8mer+wobble
2391-2411
0.002
1
6mer
19906-19933
0.002
0
7mer
13073-13083
0.002
1
6mer
15692-15709
0.002
5
8mer+wobble
5381-5403
0.001
1
7mer
16757-16782
0.001
0
6mer
8152-8176
0.001
1
6mer
13356-13380
0.001
4
6mer
17910-17933
0.001
1
6mer
1216-1235
0.001
2
6mer
12906-12921
0.001
1
6mer
6698-6709
0.001
0
6mer
11458-11484
0.001
0
6mer
2815-2835
0.001
2
6mer
3001-3020
0.001
0
6mer
4317-4343
0.001
0
6mer
15589-15608
0.001
2
6mer
2964-2985
0.000
1
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