LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-150-5p


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Gene
miRNA
Score
DIANA Links
XLOC_007253
hsa-miR-150-5p
0.932
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015543
Biotype: transcript isomorph
Gene id: XLOC_007253
Gene Name: XLOC_007253
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
263-283
0.039
1
6mer
16-33
0.015
1
RP11-136B18.2
hsa-miR-150-5p
0.932
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000422844
Biotype: lincRNA
Gene id: ENSG00000234464
Gene Name: RP11-136B18.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
9-31
0.053
0
RP11-384J4.2
hsa-miR-150-5p
0.932
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000552303
Biotype: lincRNA
Gene id: ENSG00000258081
Gene Name: RP11-384J4.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
419-443
0.031
1
7mer
311-335
0.022
1
CTD-2587M23.1
hsa-miR-150-5p
0.931
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000565428
Biotype: lincRNA
Gene id: ENSG00000260066
Gene Name: CTD-2587M23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2884-2904
0.037
0
8mer
187-213
0.008
0
7mer
358-372
0.004
0
7mer
928-945
0.002
0
6mer
848-873
0.001
0
6mer
1486-1512
0.001
0
XLOC_001362
hsa-miR-150-5p
0.931
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00002688
Biotype: transcript isomorph
Gene id: XLOC_001362
Gene Name: XLOC_001362
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1894-1911
0.029
0
7mer
662-685
0.012
0
7mer
15-40
0.005
0
6mer
1100-1123
0.002
0
6mer
1179-1201
0.002
2
6mer
1336-1359
0.002
1
6mer
900-923
0.002
1
PCAT19
hsa-miR-150-5p
0.931
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588495
Biotype: lincRNA
Gene id: ENSG00000267107
Gene Name: PCAT19
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1173-1183
0.016
1
8mer
1042-1067
0.015
0
6mer
92-119
0.013
1
6mer
1932-1955
0.005
1
6mer
1010-1025
0.004
1
KB-1674E1.2
hsa-miR-150-5p
0.931
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000622966
Biotype: sense_intronic
Gene id: ENSG00000279424
Gene Name: KB-1674E1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
193-212
0.041
2
7mer
620-630
0.004
0
7mer
1138-1163
0.004
0
6mer
1010-1032
0.002
Not Conserved
6mer
1169-1195
0.002
0
6mer
620-643
0.001
Not Conserved
XLOC_005511
hsa-miR-150-5p
0.931
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011997
Biotype: transcript isomorph
Gene id: XLOC_005511
Gene Name: XLOC_005511
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
379-393
0.033
3
7mer
319-344
0.017
1
6mer
150-170
0.003
3
RP11-778O17.4
hsa-miR-150-5p
0.930
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000558822
Biotype: antisense
Gene id: ENSG00000259541
Gene Name: RP11-778O17.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
907-924
0.048
7
6mer
2009-2036
0.002
0
6mer
1662-1677
0.002
1
6mer
789-815
0.001
0
CTA-342B11.3
hsa-miR-150-5p
0.930
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624235
Biotype: lincRNA
Gene id: ENSG00000280370
Gene Name: CTA-342B11.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4948-4968
0.008
3
8mer
23590-23615
0.005
0
7mer
17972-17995
0.004
1
7mer
1315-1325
0.003
1
7mer
13970-13994
0.003
2
7mer
19598-19608
0.002
1
7mer
16794-16819
0.002
0
7mer
7920-7930
0.002
1
6mer
18401-18405
0.002
1
6mer
3088-3105
0.002
1
7mer
6639-6654
0.002
1
7mer
10248-10258
0.002
0
7mer
22855-22865
0.002
Not Conserved
7mer
19252-19278
0.002
1
6mer
11401-11423
0.002
1
7mer
6557-6582
0.002
1
6mer
6348-6366
0.001
1
6mer
18647-18666
0.001
1
7mer
6429-6439
0.001
1
7mer
16931-16954
0.001
0
6mer
8952-8977
0.001
0
6mer
14120-14139
0.001
2
6mer
8081-8097
0.001
1
6mer
19729-19752
0.001
0
6mer
16971-16986
0.001
0
6mer
6573-6596
0.000
0
XLOC_013940
hsa-miR-150-5p
0.930
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00029017
Biotype: transcript isomorph
Gene id: XLOC_013940
Gene Name: XLOC_013940
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
301-322
0.053
1
CTD-3018O17.3
hsa-miR-150-5p
0.929
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000601562
Biotype: lincRNA
Gene id: ENSG00000269834
Gene Name: CTD-3018O17.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
658-672
0.040
1
7mer
147-164
0.013
0
XLOC_012819
hsa-miR-150-5p
0.929
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026493
Biotype: transcript isomorph
Gene id: XLOC_012819
Gene Name: XLOC_012819
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
313-338
0.053
4
LINC01013
hsa-miR-150-5p
0.929
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000443303
Biotype: lincRNA
Gene id: ENSG00000228495
Gene Name: LINC01013
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
415-440
0.034
4
7mer
43-67
0.019
2
PDXDC2P
hsa-miR-150-5p
0.929
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000529089
Biotype: processed_transcript
Gene id: ENSG00000196696
Gene Name: PDXDC2P
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
775-794
0.031
1
7mer
242-262
0.014
5
6mer
1242-1259
0.005
3
6mer
279-301
0.003
4
CTA-228A9.4
hsa-miR-150-5p
0.928
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624072
Biotype: antisense
Gene id: ENSG00000279080
Gene Name: CTA-228A9.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
8116-8132
0.006
0
7mer
18559-18586
0.005
2
7mer
524-549
0.004
0
7mer
19480-19490
0.004
0
7mer
5587-5597
0.003
1
7mer
11717-11742
0.003
1
7mer
10045-10055
0.003
1
7mer
19590-19617
0.003
0
8mer
7356-7381
0.002
0
7mer
11939-11959
0.002
0
7mer
4099-4109
0.002
0
7mer
6126-6136
0.002
1
6mer
9133-9160
0.002
0
7mer
14152-14177
0.002
Not Conserved
7mer
1774-1797
0.002
0
6mer
10574-10598
0.001
0
6mer
13841-13859
0.001
3
7mer
10730-10740
0.001
1
6mer
2511-2528
0.001
1
7mer
7491-7516
0.001
0
6mer
5940-5960
0.001
0
6mer
4260-4276
0.001
0
6mer
2787-2807
0.001
1
6mer
10332-10350
0.001
0
6mer
10636-10653
0.001
1
6mer
12705-12722
0.001
1
6mer
7535-7548
0.000
1
6mer
1814-1829
0.000
0
XLOC_008296
hsa-miR-150-5p
0.928
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017637
Biotype: transcript isomorph
Gene id: XLOC_008296
Gene Name: XLOC_008296
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
121-139
0.053
0
RP5-1198O20.4
hsa-miR-150-5p
0.928
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000453688
Biotype: lincRNA
Gene id: ENSG00000230615
Gene Name: RP5-1198O20.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
610-635
0.052
1
CTD-2006C1.2
hsa-miR-150-5p
0.928
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000592187
Biotype: retained_intron
Gene id: ENSG00000219665
Gene Name: CTD-2006C1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2448-2469
0.018
0
7mer
3061-3083
0.016
0
7mer
1621-1644
0.010
0
6mer
583-607
0.009
1
XLOC_004693
hsa-miR-150-5p
0.928
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010227
Biotype: transcript isomorph
Gene id: XLOC_004693
Gene Name: XLOC_004693
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-150-5p
Sequence: ucucccaacccuuguaccagug
MirBase ID: MIMAT0000451
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
297-321
0.008
1
6mer
171-195
0.006
1
6mer
196-220
0.006
1
6mer
44-67
0.005
0
6mer
348-372
0.004
0
6mer
95-118
0.004
0
6mer
69-93
0.004
0
6mer
146-169
0.004
0
6mer
120-144
0.004
0
6mer
221-243
0.004
0
6mer
246-269
0.003
0
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