LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-149-3p


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Gene
miRNA
Score
DIANA Links
LOC100499489
hsa-miR-149-3p
0.702
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_036533.1
Biotype: antisense
Gene id: NR_036533.1 (gene)
Gene Name: LOC100499489
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
2422-2443
0.007
0
7mer
372-389
0.004
1
7mer
2433-2450
0.003
1
6mer
406-425
0.002
1
6mer
2405-2423
0.002
0
6mer
173-191
0.002
0
6mer
2189-2211
0.002
1
6mer
2030-2051
0.001
0
6mer
2079-2098
0.001
1
6mer
1642-1661
0.001
Not Conserved
KB-1471A8.1
hsa-miR-149-3p
0.702
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523563
Biotype: lincRNA
Gene id: ENSG00000245330
Gene Name: KB-1471A8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
109-136
0.025
1
RP11-857B24.5
hsa-miR-149-3p
0.701
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555157
Biotype: antisense
Gene id: ENSG00000258949
Gene Name: RP11-857B24.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
233-260
0.013
1
6mer
48-64
0.012
4
RP11-661G16.2
hsa-miR-149-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553712
Biotype: antisense
Gene id: ENSG00000258716
Gene Name: RP11-661G16.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1614-1632
0.023
2
6mer
1037-1049
0.002
1
RP11-664I21.5
hsa-miR-149-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000524453
Biotype: antisense
Gene id: ENSG00000254568
Gene Name: RP11-664I21.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
604-621
0.013
0
6mer
380-391
0.005
0
6mer
67-77
0.003
1
6mer
404-424
0.003
1
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