LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-149-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
C21orf67
hsa-miR-149-3p
0.894
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000397841
Biotype: lincRNA
Gene id: ENSG00000183250
Gene Name: C21orf67
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
369-389
0.029
0
7mer
1582-1597
0.008
1
7mer
176-198
0.002
1
6mer
2003-2026
0.002
0
6mer
190-212
0.002
1
7mer
245-263
0.002
0
6mer
1504-1525
0.001
0
PTPRD-AS1
hsa-miR-149-3p
0.894
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000430766
Biotype: lincRNA
Gene id: ENSG00000225706
Gene Name: PTPRD-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
128-152
0.034
2
6mer
249-266
0.005
2
7mer
36-53
0.003
3
7mer
128-149
0.003
0
XLOC_013541
hsa-miR-149-3p
0.893
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028182
Biotype: transcript isomorph
Gene id: XLOC_013541
Gene Name: XLOC_013541
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
602-623
0.025
2
8mer
99-119
0.017
0
6mer
450-473
0.002
2
6mer
1066-1079
0.001
1
XLOC_008910
hsa-miR-149-3p
0.893
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00019001
Biotype: transcript isomorph
Gene id: XLOC_008910
Gene Name: XLOC_008910
UCSC graphic: -
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
296-307
0.030
0
7mer
555-574
0.012
1
6mer
286-306
0.003
0
AC012594.1
hsa-miR-149-3p
0.893
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000608050
Biotype: antisense
Gene id: ENSG00000231898
Gene Name: AC012594.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
819-835
0.021
0
9mer
859-876
0.009
0
6mer
803-828
0.006
1
6mer
56-80
0.005
1
7mer
863-878
0.004
Not Conserved
NUTM2B-AS1
hsa-miR-149-3p
0.893
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000596088
Biotype: antisense
Gene id: ENSG00000225484
Gene Name: NUTM2B-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
305-326
0.045
0
RP11-542M13.3
hsa-miR-149-3p
0.893
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000598933
Biotype: lincRNA
Gene id: ENSG00000268804
Gene Name: RP11-542M13.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
346-363
0.029
0
6mer
114-132
0.008
1
7mer
440-457
0.005
1
6mer
349-376
0.003
0
FGD5-AS1
hsa-miR-149-3p
0.893
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000430166
Biotype: antisense
Gene id: ENSG00000225733
Gene Name: FGD5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1131-1156
0.035
5
7mer
607-628
0.004
1
6mer
70-83
0.004
1
6mer
586-612
0.002
1
XLOC_014219
hsa-miR-149-3p
0.893
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029585
Biotype: transcript isomorph
Gene id: XLOC_014219
Gene Name: XLOC_014219
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
362-382
0.034
1
6mer
3425-3444
0.003
1
6mer
1005-1019
0.002
1
7mer
2209-2235
0.002
0
7mer
2126-2151
0.001
1
6mer
676-698
0.001
Not Conserved
6mer
1063-1085
0.001
1
6mer
1105-1129
0.001
0
CTD-2311M21.4
hsa-miR-149-3p
0.892
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000611178
Biotype: lincRNA
Gene id: ENSG00000274937
Gene Name: CTD-2311M21.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
42-59
0.036
1
7mer
107-126
0.005
1
6mer
123-146
0.004
3
XLOC_013502
hsa-miR-149-3p
0.892
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00027863
Biotype: transcript isomorph
Gene id: XLOC_013502
Gene Name: XLOC_013502
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
534-550
0.021
0
7mer
679-698
0.017
0
6mer
370-384
0.004
0
6mer
3606-3626
0.002
Not Conserved
6mer
2914-2926
0.002
0
RP11-655C2.3
hsa-miR-149-3p
0.892
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000527054
Biotype: lincRNA
Gene id: ENSG00000255299
Gene Name: RP11-655C2.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
417-431
0.033
1
8mer
420-444
0.005
1
6mer
438-458
0.004
0
6mer
84-104
0.003
0
RP11-540K16.1
hsa-miR-149-3p
0.892
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000435023
Biotype: lincRNA
Gene id: ENSG00000237292
Gene Name: RP11-540K16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
283-305
0.021
1
8mer
186-212
0.019
0
6mer
51-73
0.005
0
CTD-3064H18.1
hsa-miR-149-3p
0.892
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587060
Biotype: antisense
Gene id: ENSG00000266916
Gene Name: CTD-3064H18.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
103-125
0.045
1
RP11-106M7.1
hsa-miR-149-3p
0.891
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000436932
Biotype: lincRNA
Gene id: ENSG00000228484
Gene Name: RP11-106M7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1223-1241
0.035
1
7mer
1009-1029
0.008
0
6mer
66-91
0.003
1
LCMT1-AS2
hsa-miR-149-3p
0.891
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565214
Biotype: antisense
Gene id: ENSG00000260034
Gene Name: LCMT1-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5088-5106
0.014
1
7mer
1230-1255
0.010
1
7mer
2129-2143
0.007
1
6mer
1821-1834
0.004
1
6mer
5415-5430
0.003
0
6mer
2060-2079
0.002
1
6mer
1221-1242
0.002
1
6mer
1907-1926
0.002
0
6mer
4328-4353
0.002
0
RP11-452C8.1
hsa-miR-149-3p
0.891
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000506460
Biotype: lincRNA
Gene id: ENSG00000248408
Gene Name: RP11-452C8.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
511-532
0.024
1
7mer
578-602
0.018
1
6mer
148-168
0.003
1
MEG3
hsa-miR-149-3p
0.890
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: NR_046471.1
Biotype: lincRNA
Gene id: NR_046471.1 (gene)
Gene Name: MEG3
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
462-487
0.040
3
6mer
1237-1261
0.004
3
AL133247.2
hsa-miR-149-3p
0.889
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000435713
Biotype: antisense
Gene id: ENSG00000228563
Gene Name: AL133247.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
114-139
0.045
0
MIR22HG
hsa-miR-149-3p
0.889
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000573127
Biotype: lincRNA
Gene id: ENSG00000186594
Gene Name: MIR22HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
714-739
0.040
0
6mer
786-812
0.003
2
6mer
279-298
0.002
3
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept