LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-148b-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
DARS-AS1
hsa-miR-148b-5p
0.729
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000597450
Biotype: antisense
Gene id: ENSG00000231890
Gene Name: DARS-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1352-1365
0.027
1
CTD-2251F13.1
hsa-miR-148b-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000508469
Biotype: lincRNA
Gene id: ENSG00000248975
Gene Name: CTD-2251F13.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
36-55
0.027
1
RP11-196H14.3
hsa-miR-148b-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000536455
Biotype: antisense
Gene id: ENSG00000255629
Gene Name: RP11-196H14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
431-443
0.027
8
RP11-502M1.2
hsa-miR-148b-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000512652
Biotype: lincRNA
Gene id: ENSG00000249425
Gene Name: RP11-502M1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
65-79
0.018
1
6mer
98-111
0.009
1
TEX41
hsa-miR-148b-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000445791
Biotype: lincRNA
Gene id: ENSG00000226674
Gene Name: TEX41
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2117-2139
0.021
7
7mer
2615-2631
0.005
3
RP11-169F17.1
hsa-miR-148b-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000581862
Biotype: lincRNA
Gene id: ENSG00000263711
Gene Name: RP11-169F17.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3290-3314
0.011
0
7mer
1088-1104
0.007
0
7mer
1952-1971
0.005
1
6mer
3306-3327
0.004
0
XLOC_010585
hsa-miR-148b-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021984
Biotype: transcript isomorph
Gene id: XLOC_010585
Gene Name: XLOC_010585
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
53-75
0.006
0
6mer
581-605
0.006
4
7mer
3031-3050
0.005
0
6mer
2518-2542
0.004
2
6mer
925-932
0.003
1
6mer
1161-1172
0.002
0
RP11-414H23.3
hsa-miR-148b-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000510153
Biotype: lincRNA
Gene id: ENSG00000251093
Gene Name: RP11-414H23.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
322-337
0.027
0
RP11-211G23.1
hsa-miR-148b-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000562341
Biotype: lincRNA
Gene id: ENSG00000259854
Gene Name: RP11-211G23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
619-638
0.022
4
6mer
2196-2205
0.005
1
XLOC_002013
hsa-miR-148b-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004173
Biotype: transcript isomorph
Gene id: XLOC_002013
Gene Name: XLOC_002013
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
219-240
0.019
0
6mer
243-260
0.007
3
LINC00645
hsa-miR-148b-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000557399
Biotype: lincRNA
Gene id: ENSG00000258548
Gene Name: LINC00645
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
212-234
0.027
10
XLOC_007644
hsa-miR-148b-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00016268
Biotype: transcript isomorph
Gene id: XLOC_007644
Gene Name: XLOC_007644
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
384-406
0.022
1
6mer
1252-1267
0.005
1
RP11-96D1.10
hsa-miR-148b-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000571975
Biotype: sense_overlapping
Gene id: ENSG00000263276
Gene Name: RP11-96D1.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
752-771
0.017
1
6mer
989-1013
0.004
3
6mer
2154-2163
0.004
3
6mer
1949-1972
0.002
Not Conserved
UBE2F-SCLY
hsa-miR-148b-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_037904.1
Biotype: sense
Gene id: NR_037904.1 (gene)
Gene Name: UBE2F-SCLY
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
312-335
0.025
8
7mer
1498-1521
0.001
1
RP11-483I13.5
hsa-miR-148b-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000564063
Biotype: antisense
Gene id: ENSG00000260879
Gene Name: RP11-483I13.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1084-1101
0.023
2
6mer
1447-1469
0.004
0
RP11-495P10.1
hsa-miR-148b-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000426101
Biotype: lincRNA
Gene id: ENSG00000231551
Gene Name: RP11-495P10.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
115-136
0.020
1
6mer
239-249
0.007
4
RP11-309H21.2
hsa-miR-148b-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000434983
Biotype: lincRNA
Gene id: ENSG00000233882
Gene Name: RP11-309H21.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
84-98
0.027
1
RP11-212P7.2
hsa-miR-148b-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000608477
Biotype: lincRNA
Gene id: ENSG00000273270
Gene Name: RP11-212P7.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
6106-6127
0.009
7
6mer
190-214
0.005
1
8mer
3812-3834
0.005
1
8mer
509-524
0.004
0
6mer
318-339
0.003
0
CPB2-AS1
hsa-miR-148b-5p
0.724
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000606991
Biotype: antisense
Gene id: ENSG00000235903
Gene Name: CPB2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3118-3142
0.009
1
6mer
3132-3152
0.006
1
6mer
73-90
0.006
1
6mer
2779-2794
0.004
1
6mer
1340-1359
0.002
0
AP000476.1
hsa-miR-148b-5p
0.724
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000453784
Biotype: lincRNA
Gene id: ENSG00000237484
Gene Name: AP000476.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2572-2593
0.012
0
6mer
20-36
0.005
1
7mer
909-924
0.003
Not Conserved
6mer
1726-1744
0.003
0
6mer
2054-2070
0.003
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept