LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-148b-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
FAM95B1
hsa-miR-148b-5p
0.813
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000592053
Biotype: lincRNA
Gene id: ENSG00000223839
Gene Name: FAM95B1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
131-150
0.035
0
XLOC_011515
hsa-miR-148b-5p
0.813
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00024148
Biotype: transcript isomorph
Gene id: XLOC_011515
Gene Name: XLOC_011515
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
71-84
0.021
1
8mer
1428-1450
0.010
1
6mer
1790-1816
0.004
1
FAM95B1
hsa-miR-148b-5p
0.813
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000610972
Biotype: lincRNA
Gene id: ENSG00000274628
Gene Name: FAM95B1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
132-151
0.035
0
XLOC_002727
hsa-miR-148b-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006125
Biotype: transcript isomorph
Gene id: XLOC_002727
Gene Name: XLOC_002727
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
297-319
0.035
1
RP11-138H8.8
hsa-miR-148b-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000621778
Biotype: sense_intronic
Gene id: ENSG00000274297
Gene Name: RP11-138H8.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
497-518
0.035
1
LOC340074
hsa-miR-148b-5p
0.812
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_027127.1
Biotype: lincRNA
Gene id: NR_027127.1 (gene)
Gene Name: LOC340074
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
575-593
0.028
3
6mer
292-304
0.006
2
RP11-95O2.5
hsa-miR-148b-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000589281
Biotype: antisense
Gene id: ENSG00000267707
Gene Name: RP11-95O2.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
402-422
0.015
11
6mer
338-360
0.012
9
6mer
360-377
0.008
10
XLOC_012035
hsa-miR-148b-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024750
Biotype: transcript isomorph
Gene id: XLOC_012035
Gene Name: XLOC_012035
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
966-988
0.035
0
AC008079.10
hsa-miR-148b-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623543
Biotype: antisense
Gene id: ENSG00000280007
Gene Name: AC008079.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
20210-20233
0.004
4
7mer
3763-3784
0.004
1
7mer
11582-11602
0.003
0
7mer
4262-4272
0.003
2
7mer
5518-5537
0.003
1
7mer
14814-14829
0.003
1
6mer
19060-19081
0.002
0
6mer
1557-1581
0.002
0
6mer
9921-9942
0.002
1
7mer
11394-11417
0.002
1
6mer
18374-18390
0.002
1
6mer
14296-14313
0.002
3
7mer
9914-9931
0.001
0
6mer
3409-3419
0.001
1
6mer
18771-18795
0.001
Not Conserved
6mer
10387-10412
0.001
1
RP5-1148A21.3
hsa-miR-148b-5p
0.811
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000584934
Biotype: antisense
Gene id: ENSG00000266680
Gene Name: RP5-1148A21.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
175-195
0.016
0
7mer
238-257
0.010
0
6mer
365-380
0.009
8
LINC01424
hsa-miR-148b-5p
0.810
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000417820
Biotype: antisense
Gene id: ENSG00000236519
Gene Name: LINC01424
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
HeLa Cervix Cancer/Malignant
- Heart Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
981-999
0.034
0
XLOC_014198
hsa-miR-148b-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029567
Biotype: transcript isomorph
Gene id: XLOC_014198
Gene Name: XLOC_014198
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
668-690
0.018
1
7mer
183-198
0.012
2
6mer
531-552
0.004
1
RP11-386J22.3
hsa-miR-148b-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000622201
Biotype: sense_intronic
Gene id: ENSG00000274421
Gene Name: RP11-386J22.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1078-1091
0.020
1
6mer
222-232
0.015
1
RP11-366L20.2
hsa-miR-148b-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000356215
Biotype: antisense
Gene id: ENSG00000197301
Gene Name: RP11-366L20.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
253-260
0.014
1
7mer
590-614
0.010
1
7mer
3160-3171
0.003
1
7mer
2994-3018
0.003
1
6mer
1078-1090
0.003
1
6mer
2366-2384
0.002
1
MKNK1-AS1
hsa-miR-148b-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000602433
Biotype: antisense
Gene id: ENSG00000269956
Gene Name: MKNK1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2355-2364
0.017
6
6mer
2188-2210
0.008
9
6mer
2067-2092
0.005
5
6mer
1555-1575
0.004
1
RP11-284J1.1
hsa-miR-148b-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606622
Biotype: lincRNA
Gene id: ENSG00000272485
Gene Name: RP11-284J1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2333-2359
0.017
0
6mer
2095-2103
0.011
7
7mer
1642-1653
0.006
4
XLOC_005570
hsa-miR-148b-5p
0.809
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011201
Biotype: transcript isomorph
Gene id: XLOC_005570
Gene Name: XLOC_005570
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1624-1650
0.017
0
6mer
1386-1394
0.011
7
7mer
933-944
0.006
4
XLOC_005715
hsa-miR-148b-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012166
Biotype: transcript isomorph
Gene id: XLOC_005715
Gene Name: XLOC_005715
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3404-3428
0.033
1
6mer
2166-2183
0.001
0
KDM4A-AS1
hsa-miR-148b-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000434346
Biotype: antisense
Gene id: ENSG00000236200
Gene Name: KDM4A-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
580-601
0.034
1
XLOC_009445
hsa-miR-148b-5p
0.808
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019641
Biotype: transcript isomorph
Gene id: XLOC_009445
Gene Name: XLOC_009445
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-148b-5p
Sequence: aaguucuguuauacacucaggc
MirBase ID: MIMAT0004699
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
362-379
0.015
0
7mer
149-168
0.008
Not Conserved
6mer
1219-1238
0.004
0
7mer
4403-4420
0.003
0
6mer
2924-2942
0.001
0
6mer
2828-2854
0.001
0
6mer
2739-2757
0.001
0
6mer
2732-2757
0.001
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept