LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-146a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP5-1017F8.2
hsa-miR-146a-5p
0.747
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000617063
Biotype: lincRNA
Gene id: ENSG00000276093
Gene Name: RP5-1017F8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
437-453
0.028
3
RP11-111A22.1
hsa-miR-146a-5p
0.746
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000561460
Biotype: antisense
Gene id: ENSG00000259536
Gene Name: RP11-111A22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1867-1881
0.025
3
6mer
1258-1280
0.004
5
RP11-932O9.10
hsa-miR-146a-5p
0.746
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000602684
Biotype: lincRNA
Gene id: ENSG00000269974
Gene Name: RP11-932O9.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
420-438
0.028
0
RP11-115E19.1
hsa-miR-146a-5p
0.746
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000532109
Biotype: lincRNA
Gene id: ENSG00000254599
Gene Name: RP11-115E19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
24-39
0.028
0
XLOC_007378
hsa-miR-146a-5p
0.745
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015685
Biotype: transcript isomorph
Gene id: XLOC_007378
Gene Name: XLOC_007378
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
811-826
0.012
Not Conserved
7mer
828-853
0.007
Not Conserved
7mer
39-64
0.006
Not Conserved
6mer
143-158
0.003
Not Conserved
AC010745.3
hsa-miR-146a-5p
0.745
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000439745
Biotype: lincRNA
Gene id: ENSG00000231266
Gene Name: AC010745.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
166-186
0.028
8
SATB1-AS1
hsa-miR-146a-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000596850
Biotype: antisense
Gene id: ENSG00000228956
Gene Name: SATB1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
57-71
0.017
3
6mer
171-195
0.006
5
6mer
274-293
0.005
4
LLNLR-470E3.1
hsa-miR-146a-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000619715
Biotype: sense_intronic
Gene id: ENSG00000273837
Gene Name: LLNLR-470E3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
175-202
0.028
0
RP11-481J2.4
hsa-miR-146a-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000622896
Biotype: antisense
Gene id: ENSG00000276259
Gene Name: RP11-481J2.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
658-683
0.024
1
6mer
858-872
0.004
1
C8orf12
hsa-miR-146a-5p
0.744
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000624614
Biotype: antisense
Gene id: ENSG00000184608
Gene Name: C8orf12
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
84-104
0.028
0
SATB1-AS1
hsa-miR-146a-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000596277
Biotype: antisense
Gene id: ENSG00000228956
Gene Name: SATB1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
182-208
0.015
3
6mer
411-430
0.007
4
6mer
308-332
0.006
5
RP11-774O3.3
hsa-miR-146a-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000505448
Biotype: lincRNA
Gene id: ENSG00000251615
Gene Name: RP11-774O3.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
272-289
0.016
0
6mer
2116-2136
0.003
1
6mer
779-793
0.003
0
6mer
929-951
0.003
1
6mer
523-543
0.002
0
6mer
1971-1992
0.001
Not Conserved
AC069363.1
hsa-miR-146a-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000616926
Biotype: antisense
Gene id: ENSG00000277089
Gene Name: AC069363.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
854-871
0.015
0
8mer
515-530
0.007
0
6mer
499-516
0.003
1
6mer
456-475
0.003
1
CTD-3216D2.5
hsa-miR-146a-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000609218
Biotype: sense_intronic
Gene id: ENSG00000272945
Gene Name: CTD-3216D2.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
288-313
0.028
2
FAM226A
hsa-miR-146a-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: NR_026595.2
Biotype: sense
Gene id: NR_026595.2 (gene)
Gene Name: FAM226A
UCSC graphic: -
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
39-58
0.020
1
6mer
275-299
0.004
0
6mer
523-544
0.004
1
FAM226B
hsa-miR-146a-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: NR_026594.1
Biotype: sense
Gene id: NR_026594.1 (gene)
Gene Name: FAM226B
UCSC graphic: -
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1966-1985
0.020
1
6mer
1725-1749
0.004
0
6mer
1479-1500
0.004
1
XLOC_003148
hsa-miR-146a-5p
0.743
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00007179
Biotype: transcript isomorph
Gene id: XLOC_003148
Gene Name: XLOC_003148
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
182-201
0.024
4
6mer
235-256
0.004
4
RP11-546O6.4
hsa-miR-146a-5p
0.742
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000562653
Biotype: lincRNA
Gene id: ENSG00000260677
Gene Name: RP11-546O6.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1642-1658
0.017
1
8mer
1005-1027
0.011
1
XLOC_002744
hsa-miR-146a-5p
0.742
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00005423
Biotype: transcript isomorph
Gene id: XLOC_002744
Gene Name: XLOC_002744
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
208-234
0.028
0
XLOC_010261
hsa-miR-146a-5p
0.742
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020997
Biotype: transcript isomorph
Gene id: XLOC_010261
Gene Name: XLOC_010261
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
552-570
0.020
1
6mer
368-390
0.008
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept