LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-146a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
SATB1-AS1
hsa-miR-146a-5p
0.892
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000595865
Biotype: antisense
Gene id: ENSG00000228956
Gene Name: SATB1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
84-110
0.016
3
8mer
734-753
0.013
0
6mer
210-234
0.006
5
6mer
568-587
0.006
4
6mer
313-332
0.005
4
MIR4534
hsa-miR-146a-5p
0.892
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623111
Biotype: sense_overlapping
Gene id: ENSG00000279010
Gene Name: MIR4534
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
43471-43490
0.008
1
7mer
33747-33773
0.005
0
9mer
52522-52546
0.004
1
7mer
34559-34570
0.004
2
6mer
19745-19768
0.003
9
6mer
41274-41300
0.002
2
6mer
26343-26357
0.002
1
6mer
39534-39551
0.002
4
6mer
30105-30130
0.002
0
6mer
33271-33291
0.001
1
6mer
37151-37173
0.001
0
6mer
14291-14307
0.001
Not Conserved
6mer
10463-10478
0.001
0
6mer
49109-49122
0.001
Not Conserved
6mer
14068-14091
0.001
0
6mer
44930-44951
0.001
0
6mer
36718-36743
0.001
0
6mer
31714-31739
0.001
1
6mer
24815-24841
0.001
4
6mer
16742-16764
0.001
Not Conserved
6mer
24930-24942
0.001
0
6mer
12090-12114
0.001
Not Conserved
6mer
14094-14121
0.000
0
XLOC_002214
hsa-miR-146a-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004339
Biotype: transcript isomorph
Gene id: XLOC_002214
Gene Name: XLOC_002214
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
765-791
0.024
1
7mer
685-702
0.020
1
6mer
1268-1285
0.001
Not Conserved
LOC284578
hsa-miR-146a-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_027086.1
Biotype: lincRNA
Gene id: NR_027086.1 (gene)
Gene Name: LOC284578
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
190-213
0.021
1
9mer
1677-1700
0.017
1
6mer
1043-1064
0.003
1
6mer
1959-1976
0.003
1
6mer
976-990
0.001
1
LINC01237
hsa-miR-146a-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000430555
Biotype: lincRNA
Gene id: ENSG00000233806
Gene Name: LINC01237
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
722-749
0.039
1
6mer
567-582
0.006
0
SPAG5-AS1
hsa-miR-146a-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000424210
Biotype: antisense
Gene id: ENSG00000227543
Gene Name: SPAG5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
765-791
0.019
4
9mer
10-31
0.015
0
6mer
1514-1539
0.006
4
6mer
64-82
0.004
1
RP11-445O3.3
hsa-miR-146a-5p
0.891
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000562127
Biotype: lincRNA
Gene id: ENSG00000260763
Gene Name: RP11-445O3.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
123-147
0.045
0
XLOC_005777
hsa-miR-146a-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011225
Biotype: transcript isomorph
Gene id: XLOC_005777
Gene Name: XLOC_005777
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1375-1391
0.023
3
7mer
739-751
0.012
1
6mer
1561-1581
0.005
4
6mer
521-537
0.004
1
RP11-116O18.1
hsa-miR-146a-5p
0.890
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000590535
Biotype: sense_intronic
Gene id: ENSG00000266968
Gene Name: RP11-116O18.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1142-1168
0.026
1
8mer
210-222
0.010
1
6mer
12-32
0.007
1
6mer
1194-1216
0.003
1
XLOC_006072
hsa-miR-146a-5p
0.889
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00014121
Biotype: transcript isomorph
Gene id: XLOC_006072
Gene Name: XLOC_006072
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1437-1457
0.045
2
RP11-30P6.6
hsa-miR-146a-5p
0.889
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000455071
Biotype: lincRNA
Gene id: ENSG00000234155
Gene Name: RP11-30P6.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1377-1393
0.023
3
7mer
741-753
0.012
1
6mer
1563-1583
0.005
4
6mer
523-539
0.004
1
SATB1-AS1
hsa-miR-146a-5p
0.889
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000596307
Biotype: antisense
Gene id: ENSG00000228956
Gene Name: SATB1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
84-110
0.016
3
8mer
548-567
0.013
0
6mer
210-234
0.006
5
6mer
313-332
0.006
4
6mer
382-401
0.005
4
RP4-753D4.2
hsa-miR-146a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000412519
Biotype: antisense
Gene id: ENSG00000227599
Gene Name: RP4-753D4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
402-422
0.042
7
6mer
495-513
0.003
0
RP11-347J14.7
hsa-miR-146a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000423499
Biotype: lincRNA
Gene id: ENSG00000231140
Gene Name: RP11-347J14.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
438-458
0.045
1
RP11-134N1.2
hsa-miR-146a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000538329
Biotype: lincRNA
Gene id: ENSG00000256084
Gene Name: RP11-134N1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
287-309
0.041
1
6mer
139-164
0.003
Not Conserved
RP11-328C8.4
hsa-miR-146a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547824
Biotype: antisense
Gene id: ENSG00000257225
Gene Name: RP11-328C8.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
309-324
0.022
0
7mer
96-109
0.012
4
6mer
789-812
0.004
5
6mer
1198-1217
0.004
11
6mer
1310-1333
0.002
3
ADAMTS9-AS1
hsa-miR-146a-5p
0.888
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000597944
Biotype: antisense
Gene id: ENSG00000241158
Gene Name: ADAMTS9-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
565-583
0.029
0
7mer
537-560
0.015
1
RP13-348B13.2
hsa-miR-146a-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000420327
Biotype: lincRNA
Gene id: ENSG00000225012
Gene Name: RP13-348B13.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
132-139
0.044
1
XLOC_009808
hsa-miR-146a-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020475
Biotype: transcript isomorph
Gene id: XLOC_009808
Gene Name: XLOC_009808
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
182-207
0.044
2
ERVK3-1
hsa-miR-146a-5p
0.887
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590505
Biotype: retained_intron
Gene id: ENSG00000142396
Gene Name: ERVK3-1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-146a-5p
Sequence: ugagaacugaauuccauggguu
MirBase ID: MIMAT0000449
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3586-3606
0.042
1
6mer
2282-2308
0.003
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept