LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-145-5p


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Gene
miRNA
Score
DIANA Links
RP11-572M11.4
hsa-miR-145-5p
0.758
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000496389
Biotype: antisense
Gene id: ENSG00000240057
Gene Name: RP11-572M11.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
645-665
0.029
1
XLOC_010920
hsa-miR-145-5p
0.758
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022618
Biotype: transcript isomorph
Gene id: XLOC_010920
Gene Name: XLOC_010920
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
607-633
0.022
1
6mer
271-285
0.004
1
6mer
158-179
0.003
1
AC073257.2
hsa-miR-145-5p
0.758
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000413991
Biotype: lincRNA
Gene id: ENSG00000237614
Gene Name: AC073257.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
384-410
0.023
3
8mer
368-387
0.007
0
RP11-861L17.3
hsa-miR-145-5p
0.758
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584226
Biotype: antisense
Gene id: ENSG00000264472
Gene Name: RP11-861L17.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
66-73
0.029
1
C20orf203
hsa-miR-145-5p
0.757
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000360785
Biotype: lincRNA
Gene id: ENSG00000198547
Gene Name: C20orf203
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
506-528
0.021
0
6mer
472-494
0.005
1
6mer
156-168
0.003
0
RP11-405K6.1
hsa-miR-145-5p
0.757
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000533049
Biotype: lincRNA
Gene id: ENSG00000254456
Gene Name: RP11-405K6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
169-182
0.024
2
7mer
271-297
0.005
0
RP11-861L17.3
hsa-miR-145-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000579678
Biotype: antisense
Gene id: ENSG00000264472
Gene Name: RP11-861L17.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
62-69
0.029
1
MUC19
hsa-miR-145-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000474954
Biotype: retained_intron
Gene id: ENSG00000205592
Gene Name: MUC19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
178-202
0.011
1
7mer
2390-2414
0.005
1
6mer
4091-4110
0.005
1
6mer
4479-4496
0.004
1
6mer
1029-1052
0.002
1
6mer
2163-2185
0.002
1
6mer
2986-3009
0.001
0
C1RL-AS1
hsa-miR-145-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000541775
Biotype: antisense
Gene id: ENSG00000205885
Gene Name: C1RL-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4099-4122
0.007
1
7mer
705-719
0.006
0
6mer
4957-4976
0.005
2
7mer
2885-2909
0.005
0
7mer
3717-3733
0.003
2
6mer
2689-2712
0.002
2
MIR663AHG
hsa-miR-145-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000615682
Biotype: lincRNA
Gene id: ENSG00000227195
Gene Name: MIR663AHG
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Lung Normal/Primary
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
530-546
0.029
0
RP11-1O2.1
hsa-miR-145-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584677
Biotype: lincRNA
Gene id: ENSG00000263547
Gene Name: RP11-1O2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
522-537
0.016
0
7mer
589-609
0.006
1
6mer
14-34
0.005
0
6mer
670-696
0.002
1
XLOC_013237
hsa-miR-145-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026801
Biotype: transcript isomorph
Gene id: XLOC_013237
Gene Name: XLOC_013237
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
458-478
0.029
1
FAM225B
hsa-miR-145-5p
0.755
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000423546
Biotype: lincRNA
Gene id: ENSG00000225684
Gene Name: FAM225B
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5529-5554
0.025
Not Conserved
6mer
4656-4676
0.003
1
6mer
3085-3111
0.001
Not Conserved
6mer
3045-3058
0.000
Not Conserved
AC005682.5
hsa-miR-145-5p
0.755
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000422542
Biotype: lincRNA
Gene id: ENSG00000228649
Gene Name: AC005682.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
342-360
0.029
1
RP11-14J7.6
hsa-miR-145-5p
0.755
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554993
Biotype: antisense
Gene id: ENSG00000258573
Gene Name: RP11-14J7.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
722-744
0.015
1
8mer
1092-1119
0.007
0
6mer
1475-1489
0.005
0
7mer
1115-1124
0.003
1
ZNF883
hsa-miR-145-5p
0.755
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000619044
Biotype: lincRNA
Gene id: ENSG00000228623
Gene Name: ZNF883
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
443-453
0.008
4
6mer
695-705
0.007
5
6mer
359-376
0.006
5
6mer
779-794
0.005
5
6mer
947-964
0.003
2
MEG3
hsa-miR-145-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: NR_046470.2
Biotype: lincRNA
Gene id: NR_046470.2 (gene)
Gene Name: MEG3
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
459-474
0.019
2
6mer
1450-1470
0.005
5
6mer
1458-1485
0.004
4
6mer
1540-1564
0.002
2
RP11-305P22.9
hsa-miR-145-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000607802
Biotype: lincRNA
Gene id: ENSG00000272259
Gene Name: RP11-305P22.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2992-3009
0.029
Not Conserved
TTN-AS1
hsa-miR-145-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000590773
Biotype: antisense
Gene id: ENSG00000237298
Gene Name: TTN-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
94-120
0.015
11
7mer
387-410
0.009
1
6mer
189-207
0.005
1
KANTR
hsa-miR-145-5p
0.754
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000604062
Biotype: lincRNA
Gene id: ENSG00000232593
Gene Name: KANTR
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-145-5p
Sequence: guccaguuuucccaggaaucccu
MirBase ID: MIMAT0000437
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
480-498
0.029
3
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