LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-143-3p


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Gene
miRNA
Score
DIANA Links
CYP51A1-AS1
hsa-miR-143-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000453068
Biotype: antisense
Gene id: ENSG00000188693
Gene Name: CYP51A1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-143-3p
Sequence: ugagaugaagcacuguagcuc
MirBase ID: MIMAT0000435
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2478-2494
0.021
2
6mer
153-167
0.003
3
XLOC_007039
hsa-miR-143-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014475
Biotype: transcript isomorph
Gene id: XLOC_007039
Gene Name: XLOC_007039
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Skeletal Muscle Normal/Primary


miRNA Details
Name: hsa-miR-143-3p
Sequence: ugagaugaagcacuguagcuc
MirBase ID: MIMAT0000435
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1236-1246
0.025
1
RP4-569M23.5
hsa-miR-143-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000599904
Biotype: antisense
Gene id: ENSG00000267882
Gene Name: RP4-569M23.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-143-3p
Sequence: ugagaugaagcacuguagcuc
MirBase ID: MIMAT0000435
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2198-2222
0.025
1
RP11-66A2.2
hsa-miR-143-3p
0.700
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000457698
Biotype: lincRNA
Gene id: ENSG00000236497
Gene Name: RP11-66A2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-143-3p
Sequence: ugagaugaagcacuguagcuc
MirBase ID: MIMAT0000435
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
305-330
0.022
1
6mer
1457-1477
0.003
1
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