LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-133b


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
AC003973.5
hsa-miR-133b
0.733
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000600071
Biotype: lincRNA
Gene id: ENSG00000269199
Gene Name: AC003973.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
414-428
0.014
1
6mer
239-259
0.013
1
EFCAB6-AS1
hsa-miR-133b
0.732
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000431327
Biotype: antisense
Gene id: ENSG00000223843
Gene Name: EFCAB6-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
655-676
0.011
1
6mer
2389-2393
0.007
Not Conserved
6mer
2186-2207
0.006
0
6mer
819-824
0.003
1
LINC00467
hsa-miR-133b
0.732
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000423222
Biotype: lincRNA
Gene id: ENSG00000153363
Gene Name: LINC00467
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
72-98
0.019
0
6mer
227-243
0.005
1
6mer
880-884
0.003
1
RP11-180C16.1
hsa-miR-133b
0.731
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000610193
Biotype: antisense
Gene id: ENSG00000273489
Gene Name: RP11-180C16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
270-295
0.007
3
6mer
75-100
0.006
2
6mer
2521-2541
0.006
9
6mer
655-669
0.003
2
6mer
1103-1121
0.003
3
6mer
3508-3533
0.002
1
FLJ41278
hsa-miR-133b
0.731
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: NR_033988.1
Biotype: lincRNA
Gene id: NR_033988.1 (gene)
Gene Name: FLJ41278
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3126-3140
0.025
0
6mer
1814-1828
0.003
3
RP11-320M2.1
hsa-miR-133b
0.731
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000553181
Biotype: lincRNA
Gene id: ENSG00000257135
Gene Name: RP11-320M2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1641-1653
0.027
3
RP1-309I22.2
hsa-miR-133b
0.730
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624184
Biotype: sense_overlapping
Gene id: ENSG00000279338
Gene Name: RP1-309I22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
16990-17005
0.006
1
7mer
14473-14500
0.004
1
7mer
14724-14744
0.003
0
6mer
9271-9275
0.002
4
6mer
19036-19051
0.002
2
6mer
18175-18193
0.002
1
6mer
16380-16398
0.001
1
6mer
10959-10980
0.001
0
6mer
20733-20749
0.001
1
6mer
24776-24796
0.001
3
6mer
18336-18356
0.001
0
6mer
18480-18506
0.001
0
CTA-941F9.10
hsa-miR-133b
0.730
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623075
Biotype: sense_overlapping
Gene id: ENSG00000280383
Gene Name: CTA-941F9.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
22551-22574
0.005
4
7mer
275-291
0.005
Not Conserved
6mer
362-379
0.003
Not Conserved
6mer
21261-21265
0.002
1
6mer
18114-18129
0.002
3
6mer
1294-1308
0.002
0
6mer
11361-11388
0.002
0
6mer
12734-12758
0.002
0
6mer
4896-4900
0.002
0
6mer
20898-20920
0.001
0
XLOC_004871
hsa-miR-133b
0.730
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010369
Biotype: transcript isomorph
Gene id: XLOC_004871
Gene Name: XLOC_004871
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
12-22
0.027
1
RP11-705O24.1
hsa-miR-133b
0.729
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520097
Biotype: lincRNA
Gene id: ENSG00000254119
Gene Name: RP11-705O24.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
468-473
0.027
2
AIRN
hsa-miR-133b
0.729
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000601203
Biotype: antisense
Gene id: ENSG00000268257
Gene Name: AIRN
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4142-4147
0.013
1
7mer
3851-3864
0.007
0
6mer
193-197
0.006
2
6mer
1912-1917
0.002
1
RP11-327F22.6
hsa-miR-133b
0.729
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000602304
Biotype: sense_intronic
Gene id: ENSG00000270120
Gene Name: RP11-327F22.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
545-551
0.027
0
RP11-231G15.3
hsa-miR-133b
0.728
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000505002
Biotype: lincRNA
Gene id: ENSG00000248876
Gene Name: RP11-231G15.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
145-159
0.027
5
FLJ37201
hsa-miR-133b
0.728
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000455699
Biotype: lincRNA
Gene id: ENSG00000240996
Gene Name: FLJ37201
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
356-375
0.020
4
6mer
585-609
0.007
0
XLOC_012980
hsa-miR-133b
0.728
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026907
Biotype: transcript isomorph
Gene id: XLOC_012980
Gene Name: XLOC_012980
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
269-281
0.027
2
RP1-80N2.3
hsa-miR-133b
0.727
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000563225
Biotype: lincRNA
Gene id: ENSG00000261211
Gene Name: RP1-80N2.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1582-1596
0.013
1
7mer
2984-3009
0.012
1
6mer
867-885
0.002
0
DLX6-AS1
hsa-miR-133b
0.727
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000430027
Biotype: antisense
Gene id: ENSG00000231764
Gene Name: DLX6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
783-788
0.015
5
7mer
14290-14303
0.009
4
6mer
4582-4594
0.002
3
DAB1-AS1
hsa-miR-133b
0.727
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000610175
Biotype: antisense
Gene id: ENSG00000226759
Gene Name: DAB1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
410-422
0.019
3
6mer
638-642
0.007
2
SMC5-AS1
hsa-miR-133b
0.727
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_039990.1
Biotype: antisense
Gene id: NR_039990.1 (gene)
Gene Name: SMC5-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
61-71
0.014
1
7mer
552-568
0.010
1
6mer
502-516
0.003
1
MGC12916
hsa-miR-133b
0.726
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000583262
Biotype: lincRNA
Gene id: ENSG00000266709
Gene Name: MGC12916
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-133b
Sequence: uuugguccccuucaaccagcua
MirBase ID: MIMAT0000770
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1618-1632
0.027
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept