LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP11-53B2.3
hsa-miR-132-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000585366
Biotype: antisense
Gene id: ENSG00000267136
Gene Name: RP11-53B2.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4458-4478
0.025
0
6mer
2436-2455
0.001
0
BDNF-AS
hsa-miR-132-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: NR_033312.1
Biotype: antisense
Gene id: NR_033312.1 (gene)
Gene Name: BDNF-AS
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1683-1708
0.023
5
6mer
1108-1133
0.003
3
RP5-837G17.1
hsa-miR-132-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000622780
Biotype: lincRNA
Gene id: ENSG00000275923
Gene Name: RP5-837G17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
51-67
0.026
2
RP11-149P24.1
hsa-miR-132-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000502901
Biotype: lincRNA
Gene id: ENSG00000253248
Gene Name: RP11-149P24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
441-463
0.026
0
AGBL1-AS1
hsa-miR-132-3p
0.721
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000564487
Biotype: antisense
Gene id: ENSG00000260125
Gene Name: AGBL1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1110-1134
0.026
3
BDNF-AS
hsa-miR-132-3p
0.720
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000499568
Biotype: antisense
Gene id: ENSG00000245573
Gene Name: BDNF-AS
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1683-1708
0.023
5
6mer
1108-1133
0.003
3
MLK7-AS1
hsa-miR-132-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000419609
Biotype: antisense
Gene id: ENSG00000238133
Gene Name: MLK7-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
315-339
0.022
1
6mer
533-557
0.005
Not Conserved
CTC-493L21.1
hsa-miR-132-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000506471
Biotype: lincRNA
Gene id: ENSG00000250544
Gene Name: CTC-493L21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
821-846
0.026
0
XLOC_004467
hsa-miR-132-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010037
Biotype: transcript isomorph
Gene id: XLOC_004467
Gene Name: XLOC_004467
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
786-813
0.026
1
XLOC_005492
hsa-miR-132-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012614
Biotype: transcript isomorph
Gene id: XLOC_005492
Gene Name: XLOC_005492
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
374-394
0.020
4
6mer
836-857
0.006
2
AC009312.1
hsa-miR-132-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000457110
Biotype: antisense
Gene id: ENSG00000238207
Gene Name: AC009312.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
129-142
0.026
1
SLC25A5-AS1
hsa-miR-132-3p
0.719
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000395539
Biotype: retained_intron
Gene id: ENSG00000224281
Gene Name: SLC25A5-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
586-612
0.012
1
7mer
221-241
0.010
1
7mer
1183-1193
0.004
1
XLOC_002585
hsa-miR-132-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006792
Biotype: transcript isomorph
Gene id: XLOC_002585
Gene Name: XLOC_002585
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2613-2635
0.008
2
7mer
1414-1431
0.006
1
6mer
6061-6077
0.005
1
6mer
4893-4897
0.003
1
6mer
1913-1935
0.002
3
6mer
1184-1201
0.002
0
6mer
1205-1227
0.001
1
6mer
1219-1236
0.001
0
RP11-30P6.6
hsa-miR-132-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000455071
Biotype: lincRNA
Gene id: ENSG00000234155
Gene Name: RP11-30P6.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2141-2157
0.012
0
7mer
1738-1756
0.010
1
6mer
575-588
0.003
0
LINC01085
hsa-miR-132-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000506739
Biotype: lincRNA
Gene id: ENSG00000248698
Gene Name: LINC01085
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1109-1128
0.026
1
RP11-379F4.4
hsa-miR-132-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000477589
Biotype: antisense
Gene id: ENSG00000240207
Gene Name: RP11-379F4.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
949-958
0.013
2
7mer
525-549
0.013
3
XLOC_005777
hsa-miR-132-3p
0.718
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011225
Biotype: transcript isomorph
Gene id: XLOC_005777
Gene Name: XLOC_005777
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Colon Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2139-2155
0.012
0
7mer
1736-1754
0.010
1
6mer
573-586
0.003
0
XLOC_008619
hsa-miR-132-3p
0.717
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018338
Biotype: transcript isomorph
Gene id: XLOC_008619
Gene Name: XLOC_008619
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1556-1578
0.019
0
6mer
217-237
0.004
1
6mer
971-996
0.002
1
6mer
1070-1095
0.002
1
XLOC_004452
hsa-miR-132-3p
0.717
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009253
Biotype: transcript isomorph
Gene id: XLOC_004452
Gene Name: XLOC_004452
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
821-846
0.026
0
USP27X-AS1
hsa-miR-132-3p
0.717
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000437322
Biotype: lincRNA
Gene id: ENSG00000234390
Gene Name: USP27X-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
17-22
0.026
4
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