LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP11-382A20.4
hsa-miR-132-3p
0.726
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000561498
Biotype: antisense
Gene id: ENSG00000259986
Gene Name: RP11-382A20.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
142-161
0.019
1
6mer
212-230
0.008
4
XLOC_002727
hsa-miR-132-3p
0.726
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006125
Biotype: transcript isomorph
Gene id: XLOC_002727
Gene Name: XLOC_002727
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3573-3594
0.014
2
7mer
769-788
0.007
1
6mer
3051-3075
0.006
3
LOC100506730
hsa-miR-132-3p
0.726
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_037847.1
Biotype: lincRNA
Gene id: NR_037847.1 (gene)
Gene Name: LOC100506730
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1760-1776
0.018
1
6mer
2350-2368
0.008
1
XLOC_010996
hsa-miR-132-3p
0.726
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00023093
Biotype: transcript isomorph
Gene id: XLOC_010996
Gene Name: XLOC_010996
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6552-6576
0.022
1
6mer
6074-6083
0.002
0
6mer
1295-1314
0.001
1
6mer
4717-4729
0.001
1
XXbac-BPGBPG55C20.2
hsa-miR-132-3p
0.725
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606125
Biotype: lincRNA
Gene id: ENSG00000272316
Gene Name: XXbac-BPGBPG55C20.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1220-1238
0.016
0
6mer
5191-5199
0.005
0
6mer
3471-3495
0.002
0
6mer
4237-4252
0.002
1
6mer
2435-2450
0.002
1
XLOC_011366
hsa-miR-132-3p
0.725
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023528
Biotype: transcript isomorph
Gene id: XLOC_011366
Gene Name: XLOC_011366
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
25-50
0.027
12
SRGAP2-AS1
hsa-miR-132-3p
0.725
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000437515
Biotype: antisense
Gene id: ENSG00000230806
Gene Name: SRGAP2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
710-720
0.013
3
7mer
495-513
0.008
1
7mer
1012-1033
0.006
1
XLOC_012599
hsa-miR-132-3p
0.725
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026176
Biotype: transcript isomorph
Gene id: XLOC_012599
Gene Name: XLOC_012599
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2158-2174
0.014
Not Conserved
6mer
2363-2390
0.005
Not Conserved
6mer
380-397
0.002
Not Conserved
6mer
1801-1816
0.002
Not Conserved
6mer
1481-1506
0.002
Not Conserved
6mer
755-770
0.002
Not Conserved
XLOC_006349
hsa-miR-132-3p
0.724
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013687
Biotype: transcript isomorph
Gene id: XLOC_006349
Gene Name: XLOC_006349
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Breast Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
56-80
0.026
0
RP11-796I2.1
hsa-miR-132-3p
0.724
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000446340
Biotype: antisense
Gene id: ENSG00000227562
Gene Name: RP11-796I2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
198-219
0.026
0
CTD-2313J23.1
hsa-miR-132-3p
0.723
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000566929
Biotype: lincRNA
Gene id: ENSG00000260072
Gene Name: CTD-2313J23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5211-5233
0.013
1
6mer
6437-6451
0.005
Not Conserved
6mer
924-942
0.003
1
6mer
2438-2465
0.002
3
6mer
3911-3932
0.002
2
6mer
2798-2820
0.001
1
AC007405.4
hsa-miR-132-3p
0.723
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000623667
Biotype: lincRNA
Gene id: ENSG00000234350
Gene Name: AC007405.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
446-472
0.026
0
RP11-769N19.2
hsa-miR-132-3p
0.723
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547084
Biotype: sense_intronic
Gene id: ENSG00000257880
Gene Name: RP11-769N19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
160-180
0.026
5
RP11-285F16.1
hsa-miR-132-3p
0.723
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608396
Biotype: lincRNA
Gene id: ENSG00000273030
Gene Name: RP11-285F16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
356-377
0.018
4
6mer
437-458
0.008
2
USP2-AS1
hsa-miR-132-3p
0.723
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000500970
Biotype: antisense
Gene id: ENSG00000245248
Gene Name: USP2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
201-224
0.026
1
XLOC_008527
hsa-miR-132-3p
0.723
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018249
Biotype: transcript isomorph
Gene id: XLOC_008527
Gene Name: XLOC_008527
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
931-948
0.026
2
RP11-388M20.9
hsa-miR-132-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000576745
Biotype: lincRNA
Gene id: ENSG00000261925
Gene Name: RP11-388M20.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1175-1192
0.026
0
XLOC_009876
hsa-miR-132-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020560
Biotype: transcript isomorph
Gene id: XLOC_009876
Gene Name: XLOC_009876
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
557-582
0.026
Not Conserved
LINC00624
hsa-miR-132-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000619867
Biotype: antisense
Gene id: ENSG00000278811
Gene Name: LINC00624
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
866-885
0.026
0
STX18-AS1
hsa-miR-132-3p
0.722
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000608184
Biotype: antisense
Gene id: ENSG00000247708
Gene Name: STX18-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2549-2566
0.017
3
8mer
816-839
0.009
1
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