LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP11-545I5.3
hsa-miR-132-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606388
Biotype: antisense
Gene id: ENSG00000235652
Gene Name: RP11-545I5.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1100-1120
0.010
Not Conserved
7mer
1026-1031
0.008
0
6mer
3736-3743
0.005
0
6mer
3392-3411
0.003
0
6mer
2464-2480
0.002
4
RP4-660H19.1
hsa-miR-132-3p
0.732
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000445976
Biotype: lincRNA
Gene id: ENSG00000225087
Gene Name: RP4-660H19.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
128-146
0.027
1
XLOC_006863
hsa-miR-132-3p
0.732
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014497
Biotype: transcript isomorph
Gene id: XLOC_006863
Gene Name: XLOC_006863
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
- Testes Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1118-1137
0.027
0
LINC01419
hsa-miR-132-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522365
Biotype: lincRNA
Gene id: ENSG00000253898
Gene Name: LINC01419
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1118-1137
0.027
0
CTD-3220F14.3
hsa-miR-132-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000611171
Biotype: antisense
Gene id: ENSG00000276846
Gene Name: CTD-3220F14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
559-575
0.018
1
7mer
650-671
0.009
Not Conserved
RMST
hsa-miR-132-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000538559
Biotype: lincRNA
Gene id: ENSG00000255794
Gene Name: RMST
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1095-1117
0.009
1
6mer
2476-2502
0.009
4
6mer
2457-2465
0.008
4
6mer
1278-1305
0.001
2
RP11-74E22.5
hsa-miR-132-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000610120
Biotype: antisense
Gene id: ENSG00000272770
Gene Name: RP11-74E22.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
53-63
0.019
3
6mer
37-49
0.008
5
RP11-232M24.1
hsa-miR-132-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000471638
Biotype: lincRNA
Gene id: ENSG00000242671
Gene Name: RP11-232M24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1620-1645
0.027
0
RP11-379P15.1
hsa-miR-132-3p
0.731
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000499752
Biotype: lincRNA
Gene id: ENSG00000246820
Gene Name: RP11-379P15.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2944-2970
0.019
7
8mer
2108-2122
0.004
0
6mer
762-783
0.003
2
6mer
1810-1830
0.001
0
RP11-829H16.3
hsa-miR-132-3p
0.730
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555108
Biotype: antisense
Gene id: ENSG00000258525
Gene Name: RP11-829H16.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
187-212
0.014
1
7mer
1714-1739
0.013
1
XLOC_004108
hsa-miR-132-3p
0.729
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008603
Biotype: transcript isomorph
Gene id: XLOC_004108
Gene Name: XLOC_004108
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
61-87
0.023
Not Conserved
6mer
240-254
0.004
0
RP11-361H10.3
hsa-miR-132-3p
0.729
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554225
Biotype: sense_overlapping
Gene id: ENSG00000258454
Gene Name: RP11-361H10.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
305-329
0.027
1
XLOC_002601
hsa-miR-132-3p
0.729
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00005968
Biotype: transcript isomorph
Gene id: XLOC_002601
Gene Name: XLOC_002601
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
74-88
0.013
0
7mer
514-539
0.007
Not Conserved
6mer
270-289
0.003
3
6mer
270-297
0.003
1
ANKRD44-IT1
hsa-miR-132-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000428191
Biotype: sense_intronic
Gene id: ENSG00000236977
Gene Name: ANKRD44-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
241-263
0.027
1
LINC00906
hsa-miR-132-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000589921
Biotype: lincRNA
Gene id: ENSG00000267339
Gene Name: LINC00906
UCSC graphic:
Expression:
  Cell Line Tissue Category
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3221-3247
0.016
0
7mer
587-608
0.009
Not Conserved
7mer
1777-1795
0.003
0
XLOC_003199
hsa-miR-132-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006575
Biotype: transcript isomorph
Gene id: XLOC_003199
Gene Name: XLOC_003199
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
951-968
0.023
0
6mer
263-281
0.004
0
RP11-736K20.6
hsa-miR-132-3p
0.728
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000531827
Biotype: lincRNA
Gene id: ENSG00000246523
Gene Name: RP11-736K20.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
602-617
0.027
5
EP300-AS1
hsa-miR-132-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000420537
Biotype: antisense
Gene id: ENSG00000231993
Gene Name: EP300-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
228-247
0.027
Not Conserved
XLOC_008207
hsa-miR-132-3p
0.727
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017361
Biotype: transcript isomorph
Gene id: XLOC_008207
Gene Name: XLOC_008207
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4199-4214
0.023
2
6mer
1093-1118
0.003
1
6mer
3062-3085
0.001
0
RP11-6B4.1
hsa-miR-132-3p
0.726
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000482617
Biotype: lincRNA
Gene id: ENSG00000243694
Gene Name: RP11-6B4.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
552-557
0.015
2
6mer
292-314
0.012
9
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