LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP11-434D9.1
hsa-miR-132-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000513234
Biotype: lincRNA
Gene id: ENSG00000249364
Gene Name: RP11-434D9.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1534-1555
0.028
1
XLOC_012488
hsa-miR-132-3p
0.737
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025662
Biotype: transcript isomorph
Gene id: XLOC_012488
Gene Name: XLOC_012488
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
503-529
0.025
0
6mer
390-409
0.003
0
RP11-383G10.5
hsa-miR-132-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000452599
Biotype: antisense
Gene id: ENSG00000225063
Gene Name: RP11-383G10.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
463-480
0.028
0
RP11-570L15.2
hsa-miR-132-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000546678
Biotype: antisense
Gene id: ENSG00000257640
Gene Name: RP11-570L15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
291-315
0.027
2
LINC00705
hsa-miR-132-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000417883
Biotype: lincRNA
Gene id: ENSG00000225269
Gene Name: LINC00705
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
354-372
0.022
1
6mer
1673-1684
0.006
1
RP11-284H18.1
hsa-miR-132-3p
0.736
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518354
Biotype: antisense
Gene id: ENSG00000253574
Gene Name: RP11-284H18.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
71-89
0.027
1
NUP50-AS1
hsa-miR-132-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000432502
Biotype: lincRNA
Gene id: ENSG00000226328
Gene Name: NUP50-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
169-184
0.027
0
XLOC_006118
hsa-miR-132-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013467
Biotype: transcript isomorph
Gene id: XLOC_006118
Gene Name: XLOC_006118
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5608-5623
0.011
Not Conserved
6mer
830-856
0.004
0
6mer
5728-5747
0.004
Not Conserved
6mer
5157-5174
0.003
0
6mer
121-140
0.003
Not Conserved
6mer
2262-2280
0.002
0
RP11-480D4.1
hsa-miR-132-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000501071
Biotype: lincRNA
Gene id: ENSG00000245729
Gene Name: RP11-480D4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
455-479
0.023
3
6mer
929-948
0.004
1
XLOC_010825
hsa-miR-132-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022499
Biotype: transcript isomorph
Gene id: XLOC_010825
Gene Name: XLOC_010825
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
211-225
0.024
1
6mer
340-360
0.003
0
SOX2-OT
hsa-miR-132-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000461063
Biotype: sense_overlapping
Gene id: ENSG00000242808
Gene Name: SOX2-OT
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
343-365
0.015
3
6mer
475-496
0.006
2
6mer
493-515
0.006
1
RP11-710F7.2
hsa-miR-132-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000512514
Biotype: antisense
Gene id: ENSG00000250740
Gene Name: RP11-710F7.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
412-438
0.027
9
LOC729506
hsa-miR-132-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_039984.1
Biotype: lincRNA
Gene id: NR_039984.1 (gene)
Gene Name: LOC729506
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
453-477
0.023
3
6mer
927-946
0.004
1
RP5-1063M23.2
hsa-miR-132-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000432994
Biotype: lincRNA
Gene id: ENSG00000236908
Gene Name: RP5-1063M23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
828-854
0.015
1
8mer
1999-2015
0.007
0
7mer
1958-1974
0.005
Not Conserved
RP3-402G11.25
hsa-miR-132-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000607943
Biotype: antisense
Gene id: ENSG00000273188
Gene Name: RP3-402G11.25
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
416-436
0.027
1
LL22NC03-22D1.1
hsa-miR-132-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624601
Biotype: lincRNA
Gene id: ENSG00000279003
Gene Name: LL22NC03-22D1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
19297-19324
0.005
1
7mer
6776-6792
0.005
3
7mer
27305-27320
0.004
0
6mer
7308-7330
0.002
2
6mer
14317-14342
0.002
0
6mer
8890-8909
0.002
1
6mer
8652-8672
0.002
0
6mer
18484-18497
0.001
2
6mer
15091-15114
0.001
0
6mer
25232-25249
0.001
0
6mer
16437-16460
0.001
0
6mer
13854-13871
0.001
Not Conserved
6mer
11561-11576
0.001
Not Conserved
LPP-AS1
hsa-miR-132-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000434996
Biotype: antisense
Gene id: ENSG00000224563
Gene Name: LPP-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
48-70
0.027
2
RP11-88E10.4
hsa-miR-132-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000613809
Biotype: lincRNA
Gene id: ENSG00000277159
Gene Name: RP11-88E10.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
923-941
0.027
1
XLOC_007064
hsa-miR-132-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014983
Biotype: transcript isomorph
Gene id: XLOC_007064
Gene Name: XLOC_007064
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
A549 Lung Cancer/Malignant
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
152-178
0.023
2
6mer
300-315
0.004
1
RP11-1143G9.5
hsa-miR-132-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000613291
Biotype: lincRNA
Gene id: ENSG00000274979
Gene Name: RP11-1143G9.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
5121-5139
0.007
1
8mer
4052-4073
0.005
1
6mer
4955-4973
0.005
1
6mer
4387-4403
0.004
1
6mer
4065-4080
0.003
1
6mer
3762-3781
0.003
1
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