LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
CTC-276P9.3
hsa-miR-132-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000509530
Biotype: lincRNA
Gene id: ENSG00000248482
Gene Name: CTC-276P9.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
55-74
0.029
7
SLMO2-ATP5E
hsa-miR-132-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: NR_037929.1
Biotype: sense
Gene id: NR_037929.1 (gene)
Gene Name: SLMO2-ATP5E
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
861-882
0.012
3
7mer
9-27
0.012
1
6mer
544-560
0.005
3
XLOC_000542
hsa-miR-132-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001254
Biotype: transcript isomorph
Gene id: XLOC_000542
Gene Name: XLOC_000542
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
619-636
0.013
1
7mer
587-608
0.006
1
6mer
790-794
0.006
0
6mer
527-545
0.005
2
RP11-297P16.3
hsa-miR-132-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000512401
Biotype: antisense
Gene id: ENSG00000251577
Gene Name: RP11-297P16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
191-213
0.022
Not Conserved
7mer
93-111
0.004
0
6mer
205-223
0.003
0
AC074286.1
hsa-miR-132-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000456746
Biotype: sense_overlapping
Gene id: ENSG00000213963
Gene Name: AC074286.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
139-157
0.016
0
6mer
188-207
0.005
4
7mer
3243-3266
0.005
0
6mer
4270-4294
0.003
2
RP5-1057B20.3
hsa-miR-132-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000615357
Biotype: lincRNA
Gene id: ENSG00000277550
Gene Name: RP5-1057B20.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
381-405
0.012
1
6mer
1000-1013
0.010
2
6mer
1047-1072
0.008
1
XLOC_004398
hsa-miR-132-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009973
Biotype: transcript isomorph
Gene id: XLOC_004398
Gene Name: XLOC_004398
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2901-2922
0.029
0
RP11-440G5.2
hsa-miR-132-3p
0.757
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000442072
Biotype: lincRNA
Gene id: ENSG00000233081
Gene Name: RP11-440G5.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
314-334
0.029
0
RP11-381K20.5
hsa-miR-132-3p
0.756
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000603314
Biotype: lincRNA
Gene id: ENSG00000270237
Gene Name: RP11-381K20.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
301-323
0.025
0
6mer
336-361
0.005
1
XLOC_007024
hsa-miR-132-3p
0.755
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014950
Biotype: transcript isomorph
Gene id: XLOC_007024
Gene Name: XLOC_007024
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
562-578
0.014
2
7mer
455-468
0.011
2
6mer
255-277
0.004
0
RP11-325K4.2
hsa-miR-132-3p
0.755
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570210
Biotype: sense_intronic
Gene id: ENSG00000261114
Gene Name: RP11-325K4.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
191-206
0.029
2
MAGI2-AS3
hsa-miR-132-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000442765
Biotype: retained_intron
Gene id: ENSG00000234456
Gene Name: MAGI2-AS3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
594-617
0.021
2
6mer
644-667
0.008
5
AP001604.3
hsa-miR-132-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000420186
Biotype: lincRNA
Gene id: ENSG00000231236
Gene Name: AP001604.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
931-950
0.024
0
6mer
389-415
0.003
0
6mer
1260-1286
0.002
Not Conserved
XLOC_010879
hsa-miR-132-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022559
Biotype: transcript isomorph
Gene id: XLOC_010879
Gene Name: XLOC_010879
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
K562 Blood Cancer/Malignant
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
233-257
0.029
1
RP11-747H7.3
hsa-miR-132-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000565058
Biotype: sense_intronic
Gene id: ENSG00000260711
Gene Name: RP11-747H7.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6142-6163
0.011
0
7mer
3646-3670
0.006
0
7mer
1893-1917
0.005
1
6mer
3485-3506
0.003
4
6mer
815-831
0.002
1
6mer
1499-1517
0.001
0
6mer
1808-1828
0.001
3
RP11-268F1.3
hsa-miR-132-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000438738
Biotype: lincRNA
Gene id: ENSG00000236164
Gene Name: RP11-268F1.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
117-133
0.029
1
XLOC_010399
hsa-miR-132-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021796
Biotype: transcript isomorph
Gene id: XLOC_010399
Gene Name: XLOC_010399
UCSC graphic: -
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
318-338
0.029
0
XLOC_012006
hsa-miR-132-3p
0.754
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024726
Biotype: transcript isomorph
Gene id: XLOC_012006
Gene Name: XLOC_012006
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1318-1336
0.029
2
XLOC_004640
hsa-miR-132-3p
0.752
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010177
Biotype: transcript isomorph
Gene id: XLOC_004640
Gene Name: XLOC_004640
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3930-3953
0.014
1
6mer
99-119
0.006
4
7mer
1085-1098
0.003
0
6mer
485-512
0.003
Not Conserved
6mer
1892-1914
0.002
1
6mer
750-769
0.001
0
RP11-80K6.2
hsa-miR-132-3p
0.751
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000426963
Biotype: lincRNA
Gene id: ENSG00000232286
Gene Name: RP11-80K6.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
304-311
0.029
1
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