LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP6-24A23.7
hsa-miR-132-3p
0.764
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000564206
Biotype: sense_overlapping
Gene id: ENSG00000261409
Gene Name: RP6-24A23.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4700-4715
0.026
2
6mer
1116-1141
0.002
1
6mer
3563-3586
0.001
0
CTD-3076O17.2
hsa-miR-132-3p
0.764
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559400
Biotype: antisense
Gene id: ENSG00000259219
Gene Name: CTD-3076O17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
25-49
0.017
Not Conserved
6mer
2243-2261
0.006
1
6mer
560-580
0.004
1
6mer
1341-1358
0.003
1
CTD-2015H6.3
hsa-miR-132-3p
0.763
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000508000
Biotype: antisense
Gene id: ENSG00000249042
Gene Name: CTD-2015H6.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
140-158
0.030
0
XLOC_003567
hsa-miR-132-3p
0.763
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007360
Biotype: transcript isomorph
Gene id: XLOC_003567
Gene Name: XLOC_003567
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
88-103
0.027
Not Conserved
6mer
12-33
0.003
1
XLOC_005571
hsa-miR-132-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011202
Biotype: transcript isomorph
Gene id: XLOC_005571
Gene Name: XLOC_005571
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2741-2760
0.026
Not Conserved
6mer
83-110
0.004
Not Conserved
BLACE
hsa-miR-132-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_103545.1
Biotype: sense
Gene id: NR_103545.1 (gene)
Gene Name: BLACE
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
192-218
0.030
0
XLOC_013265
hsa-miR-132-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027227
Biotype: transcript isomorph
Gene id: XLOC_013265
Gene Name: XLOC_013265
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
436-454
0.030
0
RP11-1109M24.5
hsa-miR-132-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577956
Biotype: lincRNA
Gene id: ENSG00000264956
Gene Name: RP11-1109M24.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
256-269
0.014
1
6mer
601-618
0.006
0
6mer
459-475
0.006
0
6mer
1804-1816
0.005
0
XLOC_008328
hsa-miR-132-3p
0.762
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017652
Biotype: transcript isomorph
Gene id: XLOC_008328
Gene Name: XLOC_008328
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Heart Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
311-330
0.030
0
LOC285768
hsa-miR-132-3p
0.761
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: NR_027116.1
Biotype: lincRNA
Gene id: NR_027116.1 (gene)
Gene Name: LOC285768
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1965-1984
0.030
Not Conserved
KB-1205A7.2
hsa-miR-132-3p
0.761
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000517397
Biotype: antisense
Gene id: ENSG00000253911
Gene Name: KB-1205A7.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
93-119
0.030
1
RP11-662J14.1
hsa-miR-132-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553464
Biotype: lincRNA
Gene id: ENSG00000258418
Gene Name: RP11-662J14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
107-131
0.030
1
CTD-2544N14.3
hsa-miR-132-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520863
Biotype: antisense
Gene id: ENSG00000253645
Gene Name: CTD-2544N14.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
526-544
0.025
4
6mer
598-623
0.005
1
XLOC_001036
hsa-miR-132-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00002486
Biotype: transcript isomorph
Gene id: XLOC_001036
Gene Name: XLOC_001036
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
530-550
0.020
8
7mer
509-536
0.010
2
RP11-486F17.1
hsa-miR-132-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000489557
Biotype: antisense
Gene id: ENSG00000257045
Gene Name: RP11-486F17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
703-714
0.016
7
7mer
561-579
0.013
3
OTX2-AS1
hsa-miR-132-3p
0.760
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000534909
Biotype: lincRNA
Gene id: ENSG00000248550
Gene Name: OTX2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1297-1311
0.026
1
6mer
639-660
0.003
0
LOC285768
hsa-miR-132-3p
0.759
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: NR_027115.2
Biotype: lincRNA
Gene id: NR_027115.2 (gene)
Gene Name: LOC285768
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2072-2091
0.029
Not Conserved
LOC91450
hsa-miR-132-3p
0.759
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: NR_026998.1
Biotype: sense
Gene id: NR_026998.1 (gene)
Gene Name: LOC91450
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2-28
0.029
5
RP11-15A1.3
hsa-miR-132-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587128
Biotype: lincRNA
Gene id: ENSG00000267058
Gene Name: RP11-15A1.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
179-198
0.015
0
6mer
223-247
0.007
2
6mer
1478-1500
0.005
1
6mer
1410-1431
0.002
0
AC074286.1
hsa-miR-132-3p
0.758
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000397057
Biotype: sense_overlapping
Gene id: ENSG00000213963
Gene Name: AC074286.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
143-161
0.016
0
6mer
192-211
0.005
4
7mer
3247-3270
0.005
0
6mer
4274-4298
0.002
2
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