LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
XLOC_001343
hsa-miR-132-3p
0.785
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00002818
Biotype: transcript isomorph
Gene id: XLOC_001343
Gene Name: XLOC_001343
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2865-2885
0.029
1
6mer
2485-2498
0.003
0
ALKBH3-AS1
hsa-miR-132-3p
0.784
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000499194
Biotype: antisense
Gene id: ENSG00000244926
Gene Name: ALKBH3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
177-198
0.021
1
8mer
1540-1555
0.008
0
6mer
1201-1228
0.003
1
XLOC_008426
hsa-miR-132-3p
0.784
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018147
Biotype: transcript isomorph
Gene id: XLOC_008426
Gene Name: XLOC_008426
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
145-167
0.032
1
AC084219.3
hsa-miR-132-3p
0.784
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000591772
Biotype: antisense
Gene id: ENSG00000267163
Gene Name: AC084219.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1779-1791
0.032
0
FLJ36777
hsa-miR-132-3p
0.783
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_027441.1
Biotype: lincRNA
Gene id: NR_027441.1 (gene)
Gene Name: FLJ36777
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
850-867
0.032
1
LINC01478
hsa-miR-132-3p
0.783
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000591487
Biotype: lincRNA
Gene id: ENSG00000267337
Gene Name: LINC01478
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
487-512
0.028
0
6mer
218-238
0.004
0
RP11-350D17.2
hsa-miR-132-3p
0.783
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000527135
Biotype: lincRNA
Gene id: ENSG00000255427
Gene Name: RP11-350D17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
291-318
0.032
1
RP1-148H17.1
hsa-miR-132-3p
0.782
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000437920
Biotype: lincRNA
Gene id: ENSG00000224565
Gene Name: RP1-148H17.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
7-32
0.032
0
RP11-645C24.5
hsa-miR-132-3p
0.782
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567370
Biotype: lincRNA
Gene id: ENSG00000260306
Gene Name: RP11-645C24.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1501-1523
0.029
4
6mer
607-631
0.003
0
CTA-929C8.9
hsa-miR-132-3p
0.781
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624278
Biotype: sense_intronic
Gene id: ENSG00000279185
Gene Name: CTA-929C8.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8709-8728
0.006
0
7mer
23593-23608
0.005
1
7mer
15556-15577
0.002
0
6mer
11221-11243
0.002
1
6mer
10936-10956
0.002
1
6mer
22523-22541
0.002
1
6mer
6438-6460
0.002
1
6mer
17186-17209
0.002
1
6mer
10602-10618
0.002
Not Conserved
6mer
3249-3266
0.002
1
6mer
11587-11602
0.002
0
6mer
23417-23437
0.002
1
6mer
10135-10149
0.001
1
6mer
11718-11743
0.001
1
PRNCR1
hsa-miR-132-3p
0.780
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_109833.1
Biotype: lincRNA
Gene id: NR_109833.1 (gene)
Gene Name: PRNCR1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1886-1901
0.021
Not Conserved
7mer
2902-2921
0.004
1
6mer
8541-8565
0.002
1
6mer
7939-7953
0.002
0
6mer
8125-8146
0.002
0
6mer
6062-6074
0.002
0
RP13-348B13.2
hsa-miR-132-3p
0.779
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000435867
Biotype: lincRNA
Gene id: ENSG00000225012
Gene Name: RP13-348B13.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
146-158
0.031
0
MIR17HG
hsa-miR-132-3p
0.779
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000582141
Biotype: retained_intron
Gene id: ENSG00000215417
Gene Name: MIR17HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2333-2357
0.017
3
7mer
1884-1897
0.008
2
6mer
1329-1346
0.003
9
6mer
1620-1640
0.002
7
6mer
1607-1628
0.002
2
XLOC_011212
hsa-miR-132-3p
0.778
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023350
Biotype: transcript isomorph
Gene id: XLOC_011212
Gene Name: XLOC_011212
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
192-208
0.031
1
XLOC_014369
hsa-miR-132-3p
0.777
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029696
Biotype: transcript isomorph
Gene id: XLOC_014369
Gene Name: XLOC_014369
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
693-712
0.022
0
6mer
2034-2046
0.005
1
6mer
1293-1314
0.002
0
6mer
1749-1766
0.002
Not Conserved
PLSCR5-AS1
hsa-miR-132-3p
0.777
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000473817
Biotype: antisense
Gene id: ENSG00000241457
Gene Name: PLSCR5-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
69-91
0.031
1
RP11-789C17.1
hsa-miR-132-3p
0.777
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000578897
Biotype: sense_intronic
Gene id: ENSG00000265413
Gene Name: RP11-789C17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1619-1641
0.031
1
XLOC_011585
hsa-miR-132-3p
0.776
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023789
Biotype: transcript isomorph
Gene id: XLOC_011585
Gene Name: XLOC_011585
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
89-105
0.023
1
6mer
432-446
0.005
3
6mer
2002-2020
0.002
0
6mer
1186-1205
0.001
0
LINC01517
hsa-miR-132-3p
0.776
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000611112
Biotype: lincRNA
Gene id: ENSG00000232624
Gene Name: LINC01517
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
133-147
0.016
0
6mer
149-170
0.015
0
ADAM20P1
hsa-miR-132-3p
0.776
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000320746
Biotype: pseudogene
Gene id: ENSG00000259158
Gene Name: ADAM20P1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1728-1751
0.030
2
6mer
1221-1242
0.001
0
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