LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
SPATA13
hsa-miR-132-3p
0.796
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000439928
Biotype: lincRNA
Gene id: ENSG00000228741
Gene Name: SPATA13
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
824-840
0.033
7
LY86-AS1
hsa-miR-132-3p
0.796
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000607278
Biotype: antisense
Gene id: ENSG00000216863
Gene Name: LY86-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
288-303
0.033
0
RP11-424G14.1
hsa-miR-132-3p
0.795
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000566193
Biotype: lincRNA
Gene id: ENSG00000260197
Gene Name: RP11-424G14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
741-753
0.017
0
7mer
1107-1117
0.011
0
6mer
1631-1650
0.004
0
LINC00554
hsa-miR-132-3p
0.794
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000564841
Biotype: antisense
Gene id: ENSG00000260738
Gene Name: LINC00554
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
337-358
0.017
0
8mer
1604-1630
0.012
8
6mer
1688-1706
0.004
8
AC073257.2
hsa-miR-132-3p
0.794
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000413991
Biotype: lincRNA
Gene id: ENSG00000237614
Gene Name: AC073257.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Ovary Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
355-369
0.016
0
8mer
412-432
0.016
1
RP11-383I23.2
hsa-miR-132-3p
0.792
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000608028
Biotype: lincRNA
Gene id: ENSG00000273374
Gene Name: RP11-383I23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3202-3217
0.017
1
7mer
1076-1100
0.008
1
6mer
3185-3200
0.005
1
6mer
2497-2521
0.002
1
XLOC_007352
hsa-miR-132-3p
0.792
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015976
Biotype: transcript isomorph
Gene id: XLOC_007352
Gene Name: XLOC_007352
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1771-1787
0.013
0
7mer
1067-1091
0.008
1
7mer
3220-3235
0.006
0
7mer
2368-2393
0.005
0
RP11-452H21.4
hsa-miR-132-3p
0.791
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000513207
Biotype: lincRNA
Gene id: ENSG00000251323
Gene Name: RP11-452H21.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
713-729
0.026
1
6mer
1421-1442
0.006
5
XLOC_011880
hsa-miR-132-3p
0.790
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024586
Biotype: transcript isomorph
Gene id: XLOC_011880
Gene Name: XLOC_011880
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3358-3381
0.028
1
6mer
899-920
0.002
1
6mer
980-995
0.002
1
LINC01447
hsa-miR-132-3p
0.790
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000429010
Biotype: lincRNA
Gene id: ENSG00000236078
Gene Name: LINC01447
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2726-2749
0.032
0
RP11-61L19.1
hsa-miR-132-3p
0.790
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000580891
Biotype: sense_intronic
Gene id: ENSG00000266805
Gene Name: RP11-61L19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
281-297
0.019
1
6mer
145-158
0.006
1
6mer
3238-3260
0.005
1
6mer
2250-2259
0.003
1
RMST
hsa-miR-132-3p
0.789
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000541282
Biotype: lincRNA
Gene id: ENSG00000255794
Gene Name: RMST
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
253-271
0.018
1
6mer
1937-1955
0.006
3
6mer
1875-1900
0.006
0
6mer
432-459
0.003
2
RP11-138P22.1
hsa-miR-132-3p
0.789
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000581901
Biotype: antisense
Gene id: ENSG00000266527
Gene Name: RP11-138P22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1518-1529
0.028
0
6mer
1899-1914
0.003
0
6mer
1049-1062
0.001
1
AP000318.2
hsa-miR-132-3p
0.788
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000427022
Biotype: lincRNA
Gene id: ENSG00000214955
Gene Name: AP000318.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
351-375
0.032
2
XLOC_011210
hsa-miR-132-3p
0.785
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023348
Biotype: transcript isomorph
Gene id: XLOC_011210
Gene Name: XLOC_011210
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4301-4325
0.016
3
6mer
4559-4582
0.008
4
6mer
4105-4122
0.005
3
6mer
2541-2549
0.002
1
6mer
1950-1968
0.001
0
RP11-398K22.12
hsa-miR-132-3p
0.785
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000441363
Biotype: antisense
Gene id: ENSG00000229852
Gene Name: RP11-398K22.12
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2334-2353
0.022
1
6mer
1562-1584
0.004
1
6mer
351-377
0.003
0
6mer
1340-1357
0.003
1
RP11-704J17.5
hsa-miR-132-3p
0.785
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606160
Biotype: lincRNA
Gene id: ENSG00000272428
Gene Name: RP11-704J17.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
359-382
0.032
7
RP11-561O23.7
hsa-miR-132-3p
0.785
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000419576
Biotype: lincRNA
Gene id: ENSG00000225337
Gene Name: RP11-561O23.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
354-370
0.032
Not Conserved
PLCE1-AS2
hsa-miR-132-3p
0.785
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000595394
Biotype: antisense
Gene id: ENSG00000232913
Gene Name: PLCE1-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
528-554
0.032
2
PTCSC3
hsa-miR-132-3p
0.785
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556013
Biotype: lincRNA
Gene id: ENSG00000259104
Gene Name: PTCSC3
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
494-518
0.032
1
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