LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
LINC00960
hsa-miR-132-3p
0.808
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000492922
Biotype: lincRNA
Gene id: ENSG00000242516
Gene Name: LINC00960
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1596-1616
0.023
1
7mer
1402-1419
0.011
0
XLOC_010853
hsa-miR-132-3p
0.807
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022327
Biotype: transcript isomorph
Gene id: XLOC_010853
Gene Name: XLOC_010853
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Lymph Node Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
840-857
0.021
4
6mer
641-650
0.009
7
6mer
298-317
0.004
0
LINC00643
hsa-miR-132-3p
0.806
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000623985
Biotype: lincRNA
Gene id: ENSG00000186369
Gene Name: LINC00643
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
840-857
0.021
4
6mer
641-650
0.009
7
6mer
298-317
0.004
0
RP5-1166F10.1
hsa-miR-132-3p
0.805
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_027088.1
Biotype: lincRNA
Gene id: NR_027088.1 (gene)
Gene Name: RP5-1166F10.1
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
220-247
0.030
0
6mer
1407-1411
0.004
1
RP5-1166F10.1
hsa-miR-132-3p
0.805
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000423197
Biotype: lincRNA
Gene id: ENSG00000235054
Gene Name: RP5-1166F10.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
220-247
0.030
0
6mer
1407-1411
0.004
1
XLOC_012701
hsa-miR-132-3p
0.803
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026194
Biotype: transcript isomorph
Gene id: XLOC_012701
Gene Name: XLOC_012701
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2085-2103
0.034
0
XLOC_006231
hsa-miR-132-3p
0.802
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013576
Biotype: transcript isomorph
Gene id: XLOC_006231
Gene Name: XLOC_006231
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Testes Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
36-48
0.034
2
RP11-770E5.1
hsa-miR-132-3p
0.802
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522575
Biotype: antisense
Gene id: ENSG00000253608
Gene Name: RP11-770E5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2328-2350
0.027
2
7mer
1784-1810
0.006
0
LINC00861
hsa-miR-132-3p
0.802
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000500989
Biotype: lincRNA
Gene id: ENSG00000245164
Gene Name: LINC00861
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4166-4175
0.013
0
7mer
3046-3051
0.007
1
6mer
194-203
0.006
0
6mer
5265-5292
0.006
1
6mer
2233-2256
0.002
1
MBNL1-AS1
hsa-miR-132-3p
0.802
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000445466
Biotype: antisense
Gene id: ENSG00000229619
Gene Name: MBNL1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
743-769
0.034
5
RP11-417E7.2
hsa-miR-132-3p
0.801
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000564830
Biotype: lincRNA
Gene id: ENSG00000261039
Gene Name: RP11-417E7.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
405-423
0.019
0
6mer
201-218
0.014
1
CTC-459F4.3
hsa-miR-132-3p
0.800
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587188
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
83-93
0.016
0
6mer
361-373
0.013
0
6mer
581-597
0.004
Not Conserved
BCYRN1
hsa-miR-132-3p
0.799
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000418539
Biotype: lincRNA
Gene id: ENSG00000236824
Gene Name: BCYRN1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
7498-7519
0.017
0
7mer
10060-10080
0.005
0
6mer
5245-5262
0.003
3
6mer
7218-7233
0.002
1
6mer
910-935
0.002
1
6mer
1155-1177
0.002
Not Conserved
6mer
2519-2543
0.001
0
ZBTB20-AS1
hsa-miR-132-3p
0.799
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000475939
Biotype: antisense
Gene id: ENSG00000241560
Gene Name: ZBTB20-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
193-214
0.020
0
8mer
570-596
0.014
1
PROX1-AS1
hsa-miR-132-3p
0.799
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000433082
Biotype: antisense
Gene id: ENSG00000230461
Gene Name: PROX1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5112-5130
0.020
1
7mer
4548-4563
0.008
0
6mer
565-578
0.002
1
6mer
2880-2902
0.002
0
6mer
3873-3896
0.002
Not Conserved
RP11-407A16.3
hsa-miR-132-3p
0.799
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000537478
Biotype: lincRNA
Gene id: ENSG00000256732
Gene Name: RP11-407A16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
119-140
0.029
0
6mer
331-345
0.004
0
LINC01478
hsa-miR-132-3p
0.798
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000587877
Biotype: lincRNA
Gene id: ENSG00000267337
Gene Name: LINC01478
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1938-1963
0.024
0
6mer
2014-2023
0.006
1
6mer
1444-1469
0.003
1
LINC00690
hsa-miR-132-3p
0.798
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000429949
Biotype: lincRNA
Gene id: ENSG00000233570
Gene Name: LINC00690
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
150-171
0.027
0
6mer
1281-1301
0.007
1
RP11-509A17.3
hsa-miR-132-3p
0.797
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000557528
Biotype: lincRNA
Gene id: ENSG00000258654
Gene Name: RP11-509A17.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
872-891
0.033
1
LINC01287
hsa-miR-132-3p
0.796
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000416982
Biotype: lincRNA
Gene id: ENSG00000234722
Gene Name: LINC01287
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
188-212
0.015
0
6mer
660-680
0.010
0
6mer
1017-1034
0.007
0
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