LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-132-3p


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Gene
miRNA
Score
DIANA Links
RP11-138A9.2
hsa-miR-132-3p
0.818
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000608412
Biotype: lincRNA
Gene id: ENSG00000273319
Gene Name: RP11-138A9.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2618-2625
0.034
1
6mer
1765-1778
0.002
2
RP11-651L5.3
hsa-miR-132-3p
0.817
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000611145
Biotype: antisense
Gene id: ENSG00000277715
Gene Name: RP11-651L5.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
210-224
0.029
0
6mer
680-690
0.003
0
6mer
1320-1343
0.003
0
RP11-466I1.1
hsa-miR-132-3p
0.817
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000530960
Biotype: lincRNA
Gene id: ENSG00000254526
Gene Name: RP11-466I1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
449-460
0.035
2
RP11-105C19.2
hsa-miR-132-3p
0.817
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567401
Biotype: lincRNA
Gene id: ENSG00000260973
Gene Name: RP11-105C19.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1502-1524
0.032
7
6mer
607-631
0.003
1
XLOC_002588
hsa-miR-132-3p
0.817
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00005407
Biotype: transcript isomorph
Gene id: XLOC_002588
Gene Name: XLOC_002588
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
166-187
0.029
0
6mer
1440-1460
0.007
1
CTD-2104P17.2
hsa-miR-132-3p
0.816
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000578640
Biotype: antisense
Gene id: ENSG00000264932
Gene Name: CTD-2104P17.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
358-370
0.020
0
7mer
167-172
0.016
0
RP3-395M20.9
hsa-miR-132-3p
0.815
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000424215
Biotype: antisense
Gene id: ENSG00000228037
Gene Name: RP3-395M20.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
142-167
0.035
1
XLOC_005620
hsa-miR-132-3p
0.814
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012089
Biotype: transcript isomorph
Gene id: XLOC_005620
Gene Name: XLOC_005620
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
257-283
0.025
1
7mer
237-251
0.009
1
RP5-1159O4.1
hsa-miR-132-3p
0.814
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000609497
Biotype: lincRNA
Gene id: ENSG00000272894
Gene Name: RP5-1159O4.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
36-59
0.029
2
6mer
139-149
0.006
1
LINC00278
hsa-miR-132-3p
0.813
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000425031
Biotype: lincRNA
Gene id: ENSG00000231535
Gene Name: LINC00278
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
366-378
0.035
0
XLOC_006242
hsa-miR-132-3p
0.812
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00014209
Biotype: transcript isomorph
Gene id: XLOC_006242
Gene Name: XLOC_006242
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2214-2233
0.035
0
AC073130.1
hsa-miR-132-3p
0.812
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000420594
Biotype: lincRNA
Gene id: ENSG00000237870
Gene Name: AC073130.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
167-178
0.031
0
6mer
329-346
0.004
1
XLOC_009643
hsa-miR-132-3p
0.812
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020304
Biotype: transcript isomorph
Gene id: XLOC_009643
Gene Name: XLOC_009643
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
492-512
0.035
0
SATB1-AS1
hsa-miR-132-3p
0.811
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000600177
Biotype: antisense
Gene id: ENSG00000228956
Gene Name: SATB1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
599-624
0.025
1
7mer
551-567
0.009
Not Conserved
XLOC_000033
hsa-miR-132-3p
0.811
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000003
Biotype: transcript isomorph
Gene id: XLOC_000033
Gene Name: XLOC_000033
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
220-247
0.030
0
6mer
1567-1571
0.004
1
XLOC_011100
hsa-miR-132-3p
0.811
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022830
Biotype: transcript isomorph
Gene id: XLOC_011100
Gene Name: XLOC_011100
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
37-61
0.021
0
7mer
827-844
0.003
0
6mer
6728-6740
0.003
1
6mer
6646-6667
0.002
2
6mer
790-815
0.002
1
6mer
4780-4795
0.002
1
6mer
2411-2434
0.001
1
XLOC_003665
hsa-miR-132-3p
0.810
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008209
Biotype: transcript isomorph
Gene id: XLOC_003665
Gene Name: XLOC_003665
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
571-592
0.030
0
6mer
458-479
0.004
1
RP11-383H13.1
hsa-miR-132-3p
0.810
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000512290
Biotype: antisense
Gene id: ENSG00000235531
Gene Name: RP11-383H13.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
738-750
0.034
0
RP11-379K17.4
hsa-miR-132-3p
0.810
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000483289
Biotype: antisense
Gene id: ENSG00000239219
Gene Name: RP11-379K17.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
6182-6205
0.012
0
7mer
603-630
0.012
1
7mer
5334-5353
0.007
2
6mer
4221-4244
0.001
1
6mer
2142-2157
0.001
0
SATB1-AS1
hsa-miR-132-3p
0.808
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000596139
Biotype: antisense
Gene id: ENSG00000228956
Gene Name: SATB1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary


miRNA Details
Name: hsa-miR-132-3p
Sequence: uaacagucuacagccauggucg
MirBase ID: MIMAT0000426
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
525-550
0.025
1
7mer
477-493
0.009
Not Conserved
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