LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-1294


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Gene
miRNA
Score
DIANA Links
ZMIZ1-AS1
hsa-miR-1294
0.701
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000456353
Biotype: antisense
Gene id: ENSG00000224596
Gene Name: ZMIZ1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2812-2833
0.016
Not Conserved
6mer
2679-2695
0.005
1
6mer
925-941
0.002
0
6mer
1218-1237
0.001
1
RP11-529E10.6
hsa-miR-1294
0.700
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000564650
Biotype: sense_overlapping
Gene id: ENSG00000261643
Gene Name: RP11-529E10.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
298-315
0.014
0
6mer
543-564
0.011
0
LUCAT1
hsa-miR-1294
0.700
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000513626
Biotype: lincRNA
Gene id: ENSG00000248323
Gene Name: LUCAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2521-2542
0.012
0
7mer
1456-1479
0.010
1
6mer
941-960
0.002
3
RP5-866L20.1
hsa-miR-1294
0.700
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000433377
Biotype: lincRNA
Gene id: ENSG00000235741
Gene Name: RP5-866L20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
428-449
0.020
1
7mer
502-518
0.004
0
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