LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-1294


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
AC005152.3
hsa-miR-1294
0.747
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000543512
Biotype: lincRNA
Gene id: ENSG00000228639
Gene Name: AC005152.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
293-316
0.028
1
LPHN3-AS1
hsa-miR-1294
0.747
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000504135
Biotype: antisense
Gene id: ENSG00000248692
Gene Name: LPHN3-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
454-474
0.023
Not Conserved
6mer
460-480
0.005
1
RP11-69H14.6
hsa-miR-1294
0.747
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000616229
Biotype: sense_overlapping
Gene id: ENSG00000259176
Gene Name: RP11-69H14.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
363-382
0.024
0
6mer
334-359
0.004
3
MEG3
hsa-miR-1294
0.746
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000452120
Biotype: lincRNA
Gene id: ENSG00000214548
Gene Name: MEG3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2291-2317
0.010
4
7mer
168-193
0.006
0
6mer
58-81
0.004
1
6mer
2620-2628
0.004
5
6mer
1653-1673
0.001
1
6mer
3050-3074
0.001
1
6mer
1246-1269
0.001
1
6mer
2750-2775
0.001
2
KCND3-IT1
hsa-miR-1294
0.746
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000439736
Biotype: sense_intronic
Gene id: ENSG00000232558
Gene Name: KCND3-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
85-106
0.028
2
RP11-550A5.2
hsa-miR-1294
0.746
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000526947
Biotype: antisense
Gene id: ENSG00000254431
Gene Name: RP11-550A5.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
171-196
0.022
0
6mer
584-602
0.003
Not Conserved
6mer
366-381
0.003
1
RP11-973H7.5
hsa-miR-1294
0.746
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000587889
Biotype: lincRNA
Gene id: ENSG00000266961
Gene Name: RP11-973H7.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
154-178
0.025
0
6mer
74-94
0.003
0
RP11-655G22.1
hsa-miR-1294
0.746
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000412486
Biotype: lincRNA
Gene id: ENSG00000232353
Gene Name: RP11-655G22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
147-173
0.028
1
C21orf90
hsa-miR-1294
0.746
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000354333
Biotype: antisense
Gene id: ENSG00000182912
Gene Name: C21orf90
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1015-1040
0.018
1
6mer
1914-1931
0.004
1
6mer
1701-1718
0.003
1
8mer+mismatch
1803-1821
0.003
0
AC104820.2
hsa-miR-1294
0.746
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000414750
Biotype: lincRNA
Gene id: ENSG00000234663
Gene Name: AC104820.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
232-256
0.028
1
MALAT1
hsa-miR-1294
0.745
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000616691
Biotype: lincRNA
Gene id: ENSG00000251562
Gene Name: MALAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
71-94
0.019
2
6mer
378-399
0.009
8
HOXA10-HOXA9
hsa-miR-1294
0.745
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_037940.1
Biotype: sense
Gene id: NR_037940.1 (gene)
Gene Name: HOXA10-HOXA9
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1249-1272
0.015
12
7mer
1291-1304
0.014
8
LARGE-AS1
hsa-miR-1294
0.745
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000438159
Biotype: antisense
Gene id: ENSG00000224973
Gene Name: LARGE-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
492-517
0.026
1
6mer
1082-1099
0.002
2
RP11-805J14.5
hsa-miR-1294
0.745
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000527232
Biotype: antisense
Gene id: ENSG00000254721
Gene Name: RP11-805J14.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
498-523
0.016
0
7mer
547-572
0.013
Not Conserved
RP11-156L14.1
hsa-miR-1294
0.745
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000582564
Biotype: antisense
Gene id: ENSG00000265702
Gene Name: RP11-156L14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1978-2001
0.028
0
CTA-384D8.35
hsa-miR-1294
0.745
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000609178
Biotype: lincRNA
Gene id: ENSG00000272666
Gene Name: CTA-384D8.35
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
406-417
0.021
1
6mer
156-172
0.007
0
RP11-805I24.1
hsa-miR-1294
0.744
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563931
Biotype: lincRNA
Gene id: ENSG00000261177
Gene Name: RP11-805I24.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7181-7197
0.013
1
6mer
7090-7105
0.004
0
6mer
944-958
0.003
1
8mer
2167-2189
0.002
0
6mer
1413-1428
0.002
3
6mer
1271-1292
0.002
1
6mer
3061-3078
0.001
1
6mer
1925-1939
0.001
0
6mer
1550-1569
0.001
0
RP11-986G18.2
hsa-miR-1294
0.744
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000613818
Biotype: lincRNA
Gene id: ENSG00000274659
Gene Name: RP11-986G18.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
189-212
0.016
1
6mer
315-329
0.012
1
XLOC_008727
hsa-miR-1294
0.744
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018880
Biotype: transcript isomorph
Gene id: XLOC_008727
Gene Name: XLOC_008727
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
398-416
0.018
1
7mer
379-387
0.007
1
6mer
248-275
0.003
0
XLOC_011091
hsa-miR-1294
0.743
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022820
Biotype: transcript isomorph
Gene id: XLOC_011091
Gene Name: XLOC_011091
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
99-116
0.028
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept