LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-1294


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
ACTN1-AS1
hsa-miR-1294
0.765
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000553961
Biotype: antisense
Gene id: ENSG00000259062
Gene Name: ACTN1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
501-510
0.025
2
7mer
287-310
0.005
1
RP11-1008C21.1
hsa-miR-1294
0.765
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000557883
Biotype: lincRNA
Gene id: ENSG00000259225
Gene Name: RP11-1008C21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
454-476
0.030
1
RP11-1217F2.15
hsa-miR-1294
0.764
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000415836
Biotype: lincRNA
Gene id: ENSG00000234089
Gene Name: RP11-1217F2.15
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
424-438
0.030
0
MIR4313
hsa-miR-1294
0.764
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000561777
Biotype: lincRNA
Gene id: ENSG00000261043
Gene Name: MIR4313
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
558-584
0.030
1
TTC28-AS1
hsa-miR-1294
0.764
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000428858
Biotype: retained_intron
Gene id: ENSG00000235954
Gene Name: TTC28-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
316-338
0.022
1
7mer
157-177
0.008
1
TTN-AS1
hsa-miR-1294
0.763
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000591867
Biotype: antisense
Gene id: ENSG00000237298
Gene Name: TTN-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
519-539
0.030
9
RP11-243A14.1
hsa-miR-1294
0.763
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564305
Biotype: lincRNA
Gene id: ENSG00000261617
Gene Name: RP11-243A14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
345-361
0.014
0
6mer
5117-5129
0.005
0
6mer
52-66
0.004
0
6mer
932-947
0.004
3
6mer
4775-4800
0.003
Not Conserved
6mer
2447-2472
0.001
Not Conserved
RP11-108M9.3
hsa-miR-1294
0.763
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000453554
Biotype: lincRNA
Gene id: ENSG00000228549
Gene Name: RP11-108M9.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
201-222
0.021
1
6mer
1374-1391
0.006
1
6mer
764-782
0.003
1
RP11-728E14.3
hsa-miR-1294
0.762
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577309
Biotype: lincRNA
Gene id: ENSG00000265043
Gene Name: RP11-728E14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1021-1040
0.008
1
6mer
1601-1610
0.008
1
6mer
2108-2116
0.007
1
6mer
2000-2009
0.003
1
6mer
699-722
0.002
0
6mer
1919-1928
0.002
0
6mer
2045-2061
0.001
0
RP4-745K6.1
hsa-miR-1294
0.762
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000432702
Biotype: lincRNA
Gene id: ENSG00000227743
Gene Name: RP4-745K6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
57-83
0.030
1
RP11-27N21.3
hsa-miR-1294
0.761
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000607754
Biotype: lincRNA
Gene id: ENSG00000272138
Gene Name: RP11-27N21.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
46-72
0.021
2
8mer
315-332
0.008
Not Conserved
FLJ39080
hsa-miR-1294
0.761
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523118
Biotype: lincRNA
Gene id: ENSG00000254349
Gene Name: FLJ39080
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1284-1310
0.020
2
7mer
976-987
0.010
2
RP5-1180E21.5
hsa-miR-1294
0.760
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000610049
Biotype: antisense
Gene id: ENSG00000273221
Gene Name: RP5-1180E21.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
359-385
0.024
3
6mer
53-75
0.006
5
XLOC_010170
hsa-miR-1294
0.760
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020893
Biotype: transcript isomorph
Gene id: XLOC_010170
Gene Name: XLOC_010170
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
189-207
0.030
Not Conserved
XLOC_005326
hsa-miR-1294
0.760
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011842
Biotype: transcript isomorph
Gene id: XLOC_005326
Gene Name: XLOC_005326
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
88-109
0.030
1
RP11-403I13.7
hsa-miR-1294
0.759
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000424684
Biotype: lincRNA
Gene id: ENSG00000263590
Gene Name: RP11-403I13.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3199-3224
0.007
0
7mer
4267-4293
0.007
Not Conserved
7mer
350-370
0.005
1
8mer
4406-4431
0.005
0
7mer
1903-1924
0.003
1
6mer
2765-2786
0.002
1
6mer
1032-1041
0.002
0
XLOC_003069
hsa-miR-1294
0.759
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006458
Biotype: transcript isomorph
Gene id: XLOC_003069
Gene Name: XLOC_003069
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
183-209
0.026
1
6mer
2062-2077
0.003
0
MIR497HG
hsa-miR-1294
0.758
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000443997
Biotype: antisense
Gene id: ENSG00000267532
Gene Name: MIR497HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
59-77
0.029
10
XLOC_001549
hsa-miR-1294
0.758
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003751
Biotype: transcript isomorph
Gene id: XLOC_001549
Gene Name: XLOC_001549
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
131-152
0.029
2
XLOC_004294
hsa-miR-1294
0.758
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009874
Biotype: transcript isomorph
Gene id: XLOC_004294
Gene Name: XLOC_004294
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Ovary Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
271-289
0.029
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept