LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-1294


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP5-997D24.3
hsa-miR-1294
0.827
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000426901
Biotype: antisense
Gene id: ENSG00000225632
Gene Name: RP5-997D24.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
388-405
0.022
0
6mer
822-840
0.007
4
6mer
822-845
0.004
2
7mer
564-588
0.003
2
AC011518.2
hsa-miR-1294
0.827
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000592668
Biotype: lincRNA
Gene id: ENSG00000267133
Gene Name: AC011518.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
103-124
0.036
6
RP11-61L19.2
hsa-miR-1294
0.826
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000608162
Biotype: lincRNA
Gene id: ENSG00000273335
Gene Name: RP11-61L19.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
142-160
0.036
2
XLOC_000796
hsa-miR-1294
0.826
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000506
Biotype: transcript isomorph
Gene id: XLOC_000796
Gene Name: XLOC_000796
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
37-60
0.036
0
RP11-256I9.2
hsa-miR-1294
0.824
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567058
Biotype: lincRNA
Gene id: ENSG00000260834
Gene Name: RP11-256I9.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
313-333
0.028
0
7mer
1222-1232
0.005
Not Conserved
6mer
446-470
0.003
0
RP11-263K19.4
hsa-miR-1294
0.823
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000422665
Biotype: antisense
Gene id: ENSG00000231064
Gene Name: RP11-263K19.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
31-51
0.036
1
XLOC_007302
hsa-miR-1294
0.823
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015931
Biotype: transcript isomorph
Gene id: XLOC_007302
Gene Name: XLOC_007302
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1047-1065
0.036
1
AC006130.3
hsa-miR-1294
0.823
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000589365
Biotype: antisense
Gene id: ENSG00000267063
Gene Name: AC006130.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
502-527
0.036
1
XLOC_012670
hsa-miR-1294
0.823
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026328
Biotype: transcript isomorph
Gene id: XLOC_012670
Gene Name: XLOC_012670
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
345-370
0.031
Not Conserved
6mer
399-418
0.005
1
LINC00559
hsa-miR-1294
0.823
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: NR_047489.1
Biotype: lincRNA
Gene id: NR_047489.1 (gene)
Gene Name: LINC00559
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
402-422
0.031
0
6mer
3634-3656
0.005
1
EHHADH-AS1
hsa-miR-1294
0.823
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000417720
Biotype: antisense
Gene id: ENSG00000223358
Gene Name: EHHADH-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1073-1095
0.036
1
RP11-486F17.1
hsa-miR-1294
0.822
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000489557
Biotype: antisense
Gene id: ENSG00000257045
Gene Name: RP11-486F17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
483-504
0.036
1
XLOC_012166
hsa-miR-1294
0.822
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025346
Biotype: transcript isomorph
Gene id: XLOC_012166
Gene Name: XLOC_012166
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
30-56
0.024
2
6mer
151-169
0.004
1
6mer
278-298
0.004
1
6mer
233-256
0.004
1
LINC01204
hsa-miR-1294
0.821
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000435394
Biotype: lincRNA
Gene id: ENSG00000229563
Gene Name: LINC01204
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
114-138
0.020
Not Conserved
7mer
1767-1794
0.015
1
RP11-1217F2.15
hsa-miR-1294
0.820
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000442649
Biotype: lincRNA
Gene id: ENSG00000234089
Gene Name: RP11-1217F2.15
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
282-296
0.035
0
LINC00559
hsa-miR-1294
0.818
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000569476
Biotype: lincRNA
Gene id: ENSG00000261446
Gene Name: LINC00559
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
402-422
0.031
0
6mer
3634-3656
0.004
1
RP11-108M9.3
hsa-miR-1294
0.818
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000438002
Biotype: lincRNA
Gene id: ENSG00000228549
Gene Name: RP11-108M9.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer+wobble
853-880
0.012
1
7mer
1540-1561
0.012
1
6mer
2313-2330
0.006
1
6mer
2103-2121
0.005
1
DKFZp451B082
hsa-miR-1294
0.817
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: NR_033862.1
Biotype: lincRNA
Gene id: NR_033862.1 (gene)
Gene Name: DKFZp451B082
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
994-1015
0.018
1
7mer
1698-1723
0.011
1
6mer
4771-4798
0.007
4
RP11-154D6.1
hsa-miR-1294
0.817
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000612512
Biotype: antisense
Gene id: ENSG00000232295
Gene Name: RP11-154D6.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
280-304
0.035
2
RP11-407H12.8
hsa-miR-1294
0.817
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000450847
Biotype: antisense
Gene id: ENSG00000229255
Gene Name: RP11-407H12.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-1294
Sequence: ugugagguuggcauuguugucu
MirBase ID: MIMAT0005884
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
818-837
0.035
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept