LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-128-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
MIAT
hsa-miR-128-3p
0.735
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000418918
Biotype: lincRNA
Gene id: ENSG00000225783
Gene Name: MIAT
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
415-434
0.027
1
LINC00662
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000561521
Biotype: lincRNA
Gene id: ENSG00000261824
Gene Name: LINC00662
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
354-368
0.004
Not Conserved
6mer
2065-2078
0.004
Not Conserved
6mer
497-510
0.004
Not Conserved
6mer
2237-2254
0.003
Not Conserved
6mer
874-887
0.003
Not Conserved
6mer
1734-1751
0.003
Not Conserved
6mer
328-345
0.003
Not Conserved
6mer
1565-1580
0.002
Not Conserved
6mer
669-692
0.002
Not Conserved
PAX8-AS1
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000437551
Biotype: antisense
Gene id: ENSG00000189223
Gene Name: PAX8-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1961-1981
0.027
2
XLOC_001726
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003921
Biotype: transcript isomorph
Gene id: XLOC_001726
Gene Name: XLOC_001726
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
146-165
0.023
1
6mer
205-231
0.002
1
6mer
892-907
0.002
Not Conserved
CTC-297N7.7
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000585303
Biotype: antisense
Gene id: ENSG00000214970
Gene Name: CTC-297N7.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
427-450
0.023
3
6mer
384-404
0.005
1
RP11-512C24.3
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000325811
Biotype: lincRNA
Gene id: ENSG00000177596
Gene Name: RP11-512C24.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
57-70
0.019
1
8mer
891-907
0.009
1
PART1
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000504876
Biotype: lincRNA
Gene id: ENSG00000152931
Gene Name: PART1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5078-5100
0.022
1
6mer
1452-1472
0.002
2
6mer
805-817
0.002
0
6mer
2664-2676
0.001
0
LINC00452
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000426859
Biotype: lincRNA
Gene id: ENSG00000229373
Gene Name: LINC00452
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
956-980
0.022
2
6mer
1570-1583
0.005
1
RP11-427J23.1
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000615947
Biotype: lincRNA
Gene id: ENSG00000275149
Gene Name: RP11-427J23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3024-3049
0.024
1
6mer
3256-3266
0.003
2
KCNQ1DN
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000441418
Biotype: antisense
Gene id: ENSG00000237941
Gene Name: KCNQ1DN
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
343-364
0.025
1
6mer
645-664
0.002
Not Conserved
RP11-527H14.1
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000583306
Biotype: lincRNA
Gene id: ENSG00000263821
Gene Name: RP11-527H14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
322-335
0.027
0
RP11-620J15.1
hsa-miR-128-3p
0.734
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000549683
Biotype: antisense
Gene id: ENSG00000257953
Gene Name: RP11-620J15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
533-557
0.027
1
XLOC_008422
hsa-miR-128-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018143
Biotype: transcript isomorph
Gene id: XLOC_008422
Gene Name: XLOC_008422
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
53-72
0.022
0
6mer
299-309
0.005
0
XLOC_001929
hsa-miR-128-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004094
Biotype: transcript isomorph
Gene id: XLOC_001929
Gene Name: XLOC_001929
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
76-97
0.027
0
CTD-2541M15.1
hsa-miR-128-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000527490
Biotype: antisense
Gene id: ENSG00000249898
Gene Name: CTD-2541M15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
41-59
0.027
1
LINC01001
hsa-miR-128-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: NR_028326.1
Biotype: lincRNA
Gene id: NR_028326.1 (gene)
Gene Name: LINC01001
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4538-4563
0.016
Not Conserved
8mer
3990-4000
0.007
Not Conserved
8mer
3058-3081
0.003
Not Conserved
7mer
3216-3235
0.002
Not Conserved
RP11-45P15.4
hsa-miR-128-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000563989
Biotype: antisense
Gene id: ENSG00000259775
Gene Name: RP11-45P15.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
620-633
0.027
0
LOC100133331
hsa-miR-128-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_028327.1
Biotype: lincRNA
Gene id: NR_028327.1 (gene)
Gene Name: LOC100133331
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4197-4222
0.015
Not Conserved
8mer
3649-3659
0.007
Not Conserved
8mer
2717-2740
0.003
Not Conserved
7mer
2875-2894
0.003
Not Conserved
XLOC_010749
hsa-miR-128-3p
0.733
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022343
Biotype: transcript isomorph
Gene id: XLOC_010749
Gene Name: XLOC_010749
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
53-80
0.018
0
6mer
122-128
0.006
0
6mer
399-411
0.003
Not Conserved
XLOC_005592
hsa-miR-128-3p
0.732
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011439
Biotype: transcript isomorph
Gene id: XLOC_005592
Gene Name: XLOC_005592
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-128-3p
Sequence: ucacagugaaccggucucuuu
MirBase ID: MIMAT0000424
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
944-966
0.007
1
9mer
2113-2130
0.007
1
6mer
3281-3297
0.004
3
6mer
5592-5608
0.003
1
6mer
774-783
0.003
0
6mer
2123-2137
0.002
1
6mer
1754-1765
0.001
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept