LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-107


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-35O15.1
hsa-miR-107
0.766
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560221
Biotype: antisense
Gene id: ENSG00000259424
Gene Name: RP11-35O15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
187-212
0.030
3
RP11-298O21.6
hsa-miR-107
0.766
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000463642
Biotype: lincRNA
Gene id: ENSG00000242924
Gene Name: RP11-298O21.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
297-318
0.030
1
AC006003.3
hsa-miR-107
0.766
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000448541
Biotype: sense_intronic
Gene id: ENSG00000231515
Gene Name: AC006003.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
288-308
0.012
3
7mer
285-308
0.010
1
6mer
265-283
0.008
5
LINC01029
hsa-miR-107
0.765
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000577408
Biotype: lincRNA
Gene id: ENSG00000265843
Gene Name: LINC01029
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
958-967
0.018
0
7mer
585-607
0.009
1
8mer
1118-1142
0.004
0
EAF1-AS1
hsa-miR-107
0.765
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000597949
Biotype: antisense
Gene id: ENSG00000249786
Gene Name: EAF1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
208-221
0.014
11
7mer
211-233
0.008
6
6mer
326-346
0.005
6
6mer
223-246
0.004
3
SGMS1-AS1
hsa-miR-107
0.765
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000443374
Biotype: antisense
Gene id: ENSG00000226200
Gene Name: SGMS1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
10926-10948
0.012
0
7mer
909-928
0.003
1
6mer
845-868
0.003
1
7mer
909-931
0.003
1
6mer
8247-8269
0.002
0
6mer
9274-9291
0.002
1
6mer
864-889
0.002
1
6mer
6132-6154
0.002
1
6mer
1643-1666
0.001
0
6mer
7440-7454
0.001
1
RP11-588K22.2
hsa-miR-107
0.765
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000569449
Biotype: sense_overlapping
Gene id: ENSG00000260244
Gene Name: RP11-588K22.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1212-1236
0.023
4
8mer
1713-1731
0.007
1
GABPB1-AS1
hsa-miR-107
0.764
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000499624
Biotype: antisense
Gene id: ENSG00000244879
Gene Name: GABPB1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
15829-15850
0.013
2
7mer
4868-4890
0.005
0
7mer
9429-9446
0.002
0
6mer
5482-5505
0.002
1
6mer
13453-13477
0.001
1
6mer
9764-9778
0.001
1
6mer
6867-6894
0.001
1
6mer
10153-10166
0.001
0
6mer
10777-10800
0.001
0
7mer
9429-9449
0.001
1
6mer
13626-13651
0.001
0
LINC00630
hsa-miR-107
0.763
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000420471
Biotype: lincRNA
Gene id: ENSG00000223546
Gene Name: LINC00630
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
174-197
0.030
1
LINC01341
hsa-miR-107
0.762
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000419361
Biotype: antisense
Gene id: ENSG00000227953
Gene Name: LINC01341
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
31-56
0.030
6
AC003665.1
hsa-miR-107
0.762
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: NR_103857.1
Biotype: antisense
Gene id: NR_103857.1 (gene)
Gene Name: AC003665.1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
862-882
0.030
3
TMEM191C
hsa-miR-107
0.762
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000456153
Biotype: retained_intron
Gene id: ENSG00000206140
Gene Name: TMEM191C
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
69-95
0.010
7
7mer
69-93
0.005
3
6mer
1361-1375
0.004
4
6mer
69-90
0.004
3
7mer
1217-1237
0.003
1
6mer
364-384
0.002
1
6mer
1256-1273
0.002
1
TTC28-AS1
hsa-miR-107
0.761
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000454741
Biotype: antisense
Gene id: ENSG00000235954
Gene Name: TTC28-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2149-2168
0.011
1
6mer
4882-4897
0.004
2
7mer
4689-4708
0.003
1
7mer
1540-1551
0.003
10
7mer
2966-2987
0.003
2
7mer
2453-2470
0.003
1
6mer
4689-4710
0.002
2
LINC00521
hsa-miR-107
0.761
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000444118
Biotype: lincRNA
Gene id: ENSG00000175699
Gene Name: LINC00521
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1267-1288
0.008
7
8mer
277-291
0.008
1
6mer
262-276
0.003
0
6mer
449-473
0.002
0
6mer
908-928
0.002
2
6mer
735-758
0.002
Not Conserved
8mer+wobble
1318-1334
0.002
3
XLOC_004252
hsa-miR-107
0.761
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009836
Biotype: transcript isomorph
Gene id: XLOC_004252
Gene Name: XLOC_004252
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
253-271
0.028
1
6mer
95-120
0.002
Not Conserved
RP11-438C19.1
hsa-miR-107
0.761
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000515822
Biotype: lincRNA
Gene id: ENSG00000250242
Gene Name: RP11-438C19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
68-87
0.018
1
6mer
66-87
0.011
1
RP11-497G19.7
hsa-miR-107
0.761
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000621942
Biotype: lincRNA
Gene id: ENSG00000275898
Gene Name: RP11-497G19.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
246-269
0.021
1
6mer
2330-2352
0.007
2
6mer
1683-1702
0.002
0
RP11-138A23.2
hsa-miR-107
0.761
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000502846
Biotype: lincRNA
Gene id: ENSG00000250180
Gene Name: RP11-138A23.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
117-142
0.016
3
6mer
298-319
0.005
4
7mer
371-387
0.005
0
7mer
262-278
0.004
0
LINC01029
hsa-miR-107
0.761
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000582805
Biotype: lincRNA
Gene id: ENSG00000265843
Gene Name: LINC01029
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
65-87
0.013
1
7mer
438-447
0.013
0
8mer
598-622
0.004
0
RP11-826N14.2
hsa-miR-107
0.761
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000512675
Biotype: antisense
Gene id: ENSG00000248469
Gene Name: RP11-826N14.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
419-437
0.027
Not Conserved
6mer
1374-1398
0.002
Not Conserved
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept