LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-107


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_006073
hsa-miR-107
0.797
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00014122
Biotype: transcript isomorph
Gene id: XLOC_006073
Gene Name: XLOC_006073
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
140-163
0.017
1
7mer
224-251
0.016
1
ZEB2-AS1
hsa-miR-107
0.797
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000427278
Biotype: antisense
Gene id: ENSG00000238057
Gene Name: ZEB2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1178-1197
0.033
2
AC004158.2
hsa-miR-107
0.797
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000561611
Biotype: lincRNA
Gene id: ENSG00000261008
Gene Name: AC004158.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1609-1626
0.008
10
7mer
517-541
0.008
8
7mer
422-448
0.008
7
6mer
425-448
0.005
9
6mer
910-935
0.004
8
RP11-624C23.1
hsa-miR-107
0.796
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000519689
Biotype: antisense
Gene id: ENSG00000253535
Gene Name: RP11-624C23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
276-299
0.028
1
6mer
409-430
0.003
1
6mer
373-394
0.002
0
LINC00111
hsa-miR-107
0.796
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: NR_024367.1
Biotype: lincRNA
Gene id: NR_024367.1 (gene)
Gene Name: LINC00111
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
371-391
0.026
0
6mer
275-299
0.007
1
LINC01125
hsa-miR-107
0.796
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000596069
Biotype: antisense
Gene id: ENSG00000228486
Gene Name: LINC01125
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
420-437
0.033
0
RP11-22P4.2
hsa-miR-107
0.795
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000524707
Biotype: lincRNA
Gene id: ENSG00000254606
Gene Name: RP11-22P4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
316-335
0.033
0
CTD-2666L21.1
hsa-miR-107
0.795
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000440004
Biotype: lincRNA
Gene id: ENSG00000234773
Gene Name: CTD-2666L21.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
63-80
0.028
0
6mer
274-300
0.002
0
6mer
317-337
0.002
1
AC022007.5
hsa-miR-107
0.794
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000621000
Biotype: lincRNA
Gene id: ENSG00000206567
Gene Name: AC022007.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
272-291
0.019
0
6mer
275-291
0.014
0
XLOC_011763
hsa-miR-107
0.794
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024442
Biotype: transcript isomorph
Gene id: XLOC_011763
Gene Name: XLOC_011763
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
228-248
0.031
1
6mer
1836-1859
0.002
0
RP11-290F5.1
hsa-miR-107
0.794
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000617323
Biotype: lincRNA
Gene id: ENSG00000249096
Gene Name: RP11-290F5.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1615-1629
0.030
1
6mer
1543-1563
0.002
0
LINC01125
hsa-miR-107
0.794
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000598144
Biotype: antisense
Gene id: ENSG00000228486
Gene Name: LINC01125
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
338-355
0.033
0
H19
hsa-miR-107
0.794
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000422826
Biotype: lincRNA
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
633-654
0.033
5
AC114783.1
hsa-miR-107
0.793
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000454927
Biotype: lincRNA
Gene id: ENSG00000237524
Gene Name: AC114783.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
16-29
0.027
5
6mer
67-86
0.006
3
RP11-983P16.2
hsa-miR-107
0.793
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000435621
Biotype: sense_intronic
Gene id: ENSG00000257475
Gene Name: RP11-983P16.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
59-75
0.014
3
7mer
84-104
0.011
3
7mer
87-101
0.007
2
RP11-804H8.6
hsa-miR-107
0.793
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000609204
Biotype: lincRNA
Gene id: ENSG00000273356
Gene Name: RP11-804H8.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
681-702
0.033
5
NDUFA6-AS1
hsa-miR-107
0.793
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000439129
Biotype: antisense
Gene id: ENSG00000237037
Gene Name: NDUFA6-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2369-2383
0.006
3
7mer
2373-2386
0.005
1
9mer
685-707
0.004
0
7mer
1320-1334
0.003
3
6mer
2203-2222
0.003
0
6mer
2642-2658
0.003
0
9mer
1734-1756
0.002
0
6mer
1154-1173
0.002
0
7mer
1324-1337
0.002
2
6mer
705-728
0.001
0
6mer
1593-1609
0.001
0
6mer
1754-1777
0.001
0
RP11-147L13.8
hsa-miR-107
0.793
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000591222
Biotype: lincRNA
Gene id: ENSG00000267731
Gene Name: RP11-147L13.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
66-86
0.033
0
TINCR
hsa-miR-107
0.792
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: NR_027064.1
Biotype: lincRNA
Gene id: NR_027064.1 (gene)
Gene Name: TINCR
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
172-190
0.006
1
7mer
3545-3570
0.005
3
7mer
3380-3398
0.004
4
6mer
500-522
0.004
1
6mer
417-442
0.004
3
7mer
3383-3408
0.004
3
6mer
3548-3573
0.002
2
7mer
1776-1802
0.002
0
6mer
1933-1952
0.001
0
RP11-624C23.1
hsa-miR-107
0.792
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523578
Biotype: antisense
Gene id: ENSG00000253535
Gene Name: RP11-624C23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
276-299
0.027
1
6mer
409-430
0.003
1
6mer
373-394
0.003
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept