LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-107


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
H19
hsa-miR-107
0.804
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000431095
Biotype: lincRNA
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
606-627
0.034
5
PPP3CB-AS1
hsa-miR-107
0.804
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000600206
Biotype: antisense
Gene id: ENSG00000221817
Gene Name: PPP3CB-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
623-646
0.010
7
7mer
623-649
0.010
7
6mer
626-651
0.009
9
6mer
606-631
0.005
6
XLOC_002410
hsa-miR-107
0.804
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004508
Biotype: transcript isomorph
Gene id: XLOC_002410
Gene Name: XLOC_002410
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
46-64
0.034
2
H19
hsa-miR-107
0.803
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000417089
Biotype: lincRNA
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
609-630
0.034
5
NEAT1
hsa-miR-107
0.803
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000612303
Biotype: lincRNA
Gene id: ENSG00000245532
Gene Name: NEAT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
472-498
0.034
4
AC022007.5
hsa-miR-107
0.802
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000420091
Biotype: lincRNA
Gene id: ENSG00000206567
Gene Name: AC022007.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1171-1190
0.012
0
6mer
1235-1255
0.011
0
6mer
1174-1190
0.009
0
6mer
867-891
0.001
Not Conserved
XLOC_007282
hsa-miR-107
0.802
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015919
Biotype: transcript isomorph
Gene id: XLOC_007282
Gene Name: XLOC_007282
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
18-39
0.034
0
RP11-24P4.1
hsa-miR-107
0.801
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000522755
Biotype: lincRNA
Gene id: ENSG00000254334
Gene Name: RP11-24P4.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
489-509
0.033
1
LINC00111
hsa-miR-107
0.801
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000413718
Biotype: lincRNA
Gene id: ENSG00000227702
Gene Name: LINC00111
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
492-512
0.026
0
6mer
396-420
0.007
1
XLOC_010596
hsa-miR-107
0.801
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021993
Biotype: transcript isomorph
Gene id: XLOC_010596
Gene Name: XLOC_010596
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
400-416
0.033
1
RP11-789F5.1
hsa-miR-107
0.800
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000479244
Biotype: lincRNA
Gene id: ENSG00000239767
Gene Name: RP11-789F5.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
25-46
0.020
3
7mer
28-46
0.013
2
H19
hsa-miR-107
0.799
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000446406
Biotype: lincRNA
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
627-648
0.033
5
AP000688.29
hsa-miR-107
0.799
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000422473
Biotype: lincRNA
Gene id: ENSG00000233393
Gene Name: AP000688.29
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
337-358
0.021
0
6mer
1899-1924
0.012
0
RP11-527H14.4
hsa-miR-107
0.799
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000578243
Biotype: lincRNA
Gene id: ENSG00000263618
Gene Name: RP11-527H14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
210-234
0.033
0
XLOC_003546
hsa-miR-107
0.799
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007535
Biotype: transcript isomorph
Gene id: XLOC_003546
Gene Name: XLOC_003546
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3081-3107
0.017
5
6mer
278-297
0.006
3
7mer
2861-2876
0.005
1
6mer
2861-2878
0.003
1
6mer
1993-2015
0.001
1
6mer
2256-2275
0.001
Not Conserved
RP11-527H14.4
hsa-miR-107
0.799
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000581351
Biotype: lincRNA
Gene id: ENSG00000263618
Gene Name: RP11-527H14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
225-249
0.033
0
ZEB2-AS1
hsa-miR-107
0.799
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000595449
Biotype: antisense
Gene id: ENSG00000238057
Gene Name: ZEB2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
84-103
0.033
2
XIST
hsa-miR-107
0.798
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000429829
Biotype: lincRNA
Gene id: ENSG00000229807
Gene Name: XIST
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
18444-18470
0.006
0
7mer
16598-16621
0.006
2
6mer
19244-19261
0.004
2
7mer
13687-13708
0.004
0
6mer
19242-19261
0.003
2
7mer
4603-4625
0.003
2
7mer
9943-9958
0.003
1
7mer
15309-15331
0.002
0
6mer
9706-9730
0.001
1
CTB-77H17.1
hsa-miR-107
0.798
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000518837
Biotype: antisense
Gene id: ENSG00000253947
Gene Name: CTB-77H17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
430-454
0.033
7
H19
hsa-miR-107
0.798
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000411861
Biotype: retained_intron
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
748-769
0.033
5
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept