LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-107


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-272L14.2
hsa-miR-107
0.866
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000614612
Biotype: sense_intronic
Gene id: ENSG00000274204
Gene Name: RP11-272L14.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
532-539
0.041
2
RP11-219E7.3
hsa-miR-107
0.866
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556197
Biotype: lincRNA
Gene id: ENSG00000259130
Gene Name: RP11-219E7.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
25-51
0.037
1
6mer
210-233
0.004
1
RP11-114G22.1
hsa-miR-107
0.865
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000538317
Biotype: lincRNA
Gene id: ENSG00000256995
Gene Name: RP11-114G22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
114-133
0.012
4
7mer
176-189
0.009
1
6mer
124-145
0.008
7
6mer
195-222
0.006
4
6mer
199-224
0.005
4
GS1-358P8.4
hsa-miR-107
0.865
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000568479
Biotype: sense_overlapping
Gene id: ENSG00000260822
Gene Name: GS1-358P8.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4219-4236
0.011
5
7mer
4395-4418
0.011
1
7mer
4012-4036
0.005
0
7mer
4239-4265
0.005
2
6mer
4482-4505
0.004
1
6mer
731-744
0.003
2
6mer
845-871
0.003
1
LOC101926935
hsa-miR-107
0.865
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: NR_110001.1
Biotype: sense
Gene id: NR_110001.1 (gene)
Gene Name: LOC101926935
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2639-2656
0.020
0
6mer
5612-5627
0.008
0
6mer
3630-3657
0.005
0
6mer
2580-2603
0.003
0
7mer
1037-1053
0.001
Not Conserved
6mer
904-921
0.001
Not Conserved
6mer
1684-1703
0.001
Not Conserved
6mer
1476-1491
0.001
Not Conserved
6mer
1035-1053
0.001
Not Conserved
6mer
1474-1491
0.000
Not Conserved
RP11-166D19.1
hsa-miR-107
0.864
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000530955
Biotype: sense_overlapping
Gene id: ENSG00000255248
Gene Name: RP11-166D19.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
687-705
0.035
7
6mer
403-427
0.004
2
6mer
375-396
0.003
3
RP11-356J5.12
hsa-miR-107
0.864
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000527511
Biotype: lincRNA
Gene id: ENSG00000250303
Gene Name: RP11-356J5.12
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
134-160
0.037
2
6mer
279-300
0.004
2
NUTM2A-AS1
hsa-miR-107
0.863
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000446751
Biotype: antisense
Gene id: ENSG00000223482
Gene Name: NUTM2A-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
780-800
0.029
0
7mer
2004-2018
0.007
0
6mer
496-513
0.005
1
MIR133A1HG
hsa-miR-107
0.863
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000581072
Biotype: antisense
Gene id: ENSG00000265142
Gene Name: MIR133A1HG
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3986-4002
0.032
5
6mer
3995-4017
0.006
2
6mer
691-717
0.003
0
DNM3OS
hsa-miR-107
0.863
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_038397.2
Biotype: antisense
Gene id: NR_038397.2 (gene)
Gene Name: DNM3OS
UCSC graphic: -
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
296-322
0.036
1
7mer
6811-6828
0.003
0
6mer
2505-2520
0.002
1
RP11-402G3.3
hsa-miR-107
0.862
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000612244
Biotype: lincRNA
Gene id: ENSG00000230601
Gene Name: RP11-402G3.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
526-543
0.030
6
7mer
437-460
0.008
Not Conserved
6mer
182-203
0.002
1
RP11-178L8.5
hsa-miR-107
0.862
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570286
Biotype: sense_intronic
Gene id: ENSG00000261697
Gene Name: RP11-178L8.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
36-53
0.034
1
6mer
540-559
0.004
Not Conserved
6mer
375-398
0.003
0
RP11-680F8.1
hsa-miR-107
0.861
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000536835
Biotype: antisense
Gene id: ENSG00000256802
Gene Name: RP11-680F8.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
540-562
0.030
1
6mer
38-63
0.004
1
6mer
1510-1536
0.003
1
6mer
276-295
0.002
1
6mer
276-297
0.002
1
SEPT5-GP1BB
hsa-miR-107
0.861
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: NR_037612.1
Biotype: sense
Gene id: NR_037612.1 (gene)
Gene Name: SEPT5-GP1BB
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
502-516
0.009
12
7mer
1104-1126
0.007
5
7mer
2742-2758
0.004
4
7mer
2265-2290
0.003
4
6mer
2719-2731
0.003
6
6mer
3111-3126
0.003
1
7mer
2726-2746
0.003
6
7mer
2737-2755
0.003
2
6mer
2691-2716
0.003
4
6mer
2610-2631
0.002
5
6mer
2719-2733
0.002
4
6mer
2444-2467
0.001
1
RP11-6F2.5
hsa-miR-107
0.861
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000469196
Biotype: lincRNA
Gene id: ENSG00000241544
Gene Name: RP11-6F2.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1362-1385
0.038
1
6mer
626-643
0.003
3
RP11-244B22.6
hsa-miR-107
0.861
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564059
Biotype: lincRNA
Gene id: ENSG00000261398
Gene Name: RP11-244B22.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
764-787
0.040
0
RP11-703H8.9
hsa-miR-107
0.860
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000529875
Biotype: antisense
Gene id: ENSG00000254404
Gene Name: RP11-703H8.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8-23
0.040
1
FAR2P1
hsa-miR-107
0.859
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_026758.1
Biotype: lincRNA
Gene id: NR_026758.1 (gene)
Gene Name: FAR2P1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
272-299
0.036
1
6mer
3697-3710
0.003
1
6mer
1914-1929
0.001
Not Conserved
RP5-1160K1.8
hsa-miR-107
0.859
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000526411
Biotype: antisense
Gene id: ENSG00000254942
Gene Name: RP5-1160K1.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
454-475
0.031
10
6mer
488-506
0.005
5
6mer
546-569
0.004
5
XLOC_003406
hsa-miR-107
0.859
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006773
Biotype: transcript isomorph
Gene id: XLOC_003406
Gene Name: XLOC_003406
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
44-70
0.012
1
7mer
3431-3448
0.006
0
6mer
652-670
0.005
1
6mer
2640-2659
0.004
1
6mer
2029-2048
0.004
1
6mer
1408-1430
0.003
1
6mer
3235-3251
0.003
1
6mer
1549-1574
0.002
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept