LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-107


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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-107
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
17090-17114
0.017
2
8mer
9911-9933
0.008
1
8mer
16822-16839
0.007
0
8mer
210932-210949
0.007
Not Conserved
8mer
61279-61302
0.007
0
7mer
42343-42364
0.006
1
7mer
120307-120321
0.005
12
7mer
126671-126696
0.005
5
7mer
76880-76896
0.005
1
8mer
131445-131468
0.005
1
7mer
165233-165260
0.004
0
7mer
130989-131008
0.004
1
7mer
66573-66593
0.004
1
6mer
123810-123829
0.004
9
7mer
55564-55586
0.004
3
7mer
83640-83657
0.004
2
8mer
171503-171527
0.004
1
8mer
259249-259270
0.004
1
8mer
265418-265443
0.004
Not Conserved
6mer
119551-119574
0.003
8
7mer
123064-123084
0.003
Not Conserved
7mer
99424-99434
0.003
3
8mer
72094-72116
0.003
1
7mer
35336-35359
0.003
3
7mer
99672-99683
0.003
1
7mer
261018-261033
0.003
0
7mer
120105-120120
0.003
10
7mer
178317-178325
0.003
Not Conserved
7mer
195021-195046
0.003
1
7mer
109879-109902
0.003
0
7mer
259719-259744
0.003
Not Conserved
6mer
88614-88636
0.003
3
6mer
117621-117638
0.003
2
7mer
33562-33589
0.003
Not Conserved
8mer
224248-224265
0.003
0
9mer
261038-261059
0.003
0
6mer
82925-82946
0.002
1
8mer
103912-103937
0.002
0
6mer
150092-150112
0.002
8
6mer
104292-104316
0.002
5
6mer
55275-55289
0.002
5
8mer
7451-7462
0.002
1
6mer
57560-57578
0.002
5
7mer
118882-118907
0.002
1
6mer
88013-88036
0.002
1
6mer
100177-100186
0.002
4
6mer
181622-181635
0.002
3
7mer
179947-179965
0.002
0
6mer
75533-75558
0.002
4
7mer
124539-124563
0.002
3
8mer
150606-150626
0.002
1
7mer
264867-264879
0.002
0
6mer
156093-156120
0.002
1
6mer
12933-12947
0.002
8
7mer
20155-20165
0.002
1
6mer
118231-118251
0.002
8
6mer
74838-74864
0.002
4
8mer
2344-2371
0.002
1
6mer
52967-52991
0.002
3
6mer
58425-58438
0.002
4
6mer
226716-226742
0.002
0
6mer
100247-100264
0.002
7
6mer
6783-6806
0.002
2
7mer
62816-62833
0.002
Not Conserved
6mer
53777-53790
0.002
4
6mer
57722-57743
0.002
3
6mer
119712-119730
0.002
9
6mer
197218-197245
0.002
1
6mer
178499-178526
0.002
4
6mer
204562-204577
0.002
0
6mer
266161-266185
0.002
1
6mer
188209-188234
0.001
1
6mer
95108-95130
0.001
1
6mer
54782-54801
0.001
4
6mer
13070-13088
0.001
8
6mer
136381-136400
0.001
1
6mer
125476-125494
0.001
6
6mer
25950-25971
0.001
3
6mer
86540-86562
0.001
2
6mer
124113-124140
0.001
1
6mer
176771-176795
0.001
4
6mer
120349-120372
0.001
8
6mer
231406-231428
0.001
0
7mer
150602-150629
0.001
3
6mer
18054-18077
0.001
0
6mer
61700-61724
0.001
0
6mer
93434-93447
0.001
1
6mer
29095-29112
0.001
4
6mer
206575-206594
0.001
0
6mer
215543-215569
0.001
2
6mer
120612-120626
0.001
3
6mer
211527-211551
0.001
2
6mer
260005-260030
0.001
2
6mer
222721-222741
0.001
1
7mer
90247-90266
0.001
0
6mer
117242-117268
0.001
1
6mer
74586-74606
0.001
3
7mer
256025-256038
0.001
0
6mer
223276-223302
0.001
0
6mer
139218-139240
0.001
4
6mer
2201-2222
0.001
1
6mer
190471-190493
0.001
0
6mer
198840-198861
0.001
1
6mer
212059-212076
0.001
1
6mer
5440-5457
0.001
0
6mer
84242-84265
0.001
1
6mer
226434-226452
0.001
1
6mer
23948-23971
0.001
1
6mer
115858-115881
0.001
1
7mer
218920-218942
0.001
0
6mer
150863-150882
0.001
0
6mer
93305-93328
0.001
1
6mer
209914-209934
0.001
1
6mer
49244-49270
0.001
1
7mer
7451-7465
0.001
1
6mer
242250-242259
0.001
1
6mer
185844-185867
0.001
0
6mer
246524-246541
0.001
0
6mer
128859-128874
0.001
3
6mer
166942-166962
0.001
0
6mer
140147-140173
0.001
1
7mer
103915-103940
0.001
1
6mer
188365-188384
0.001
0
6mer
149315-149338
0.001
Not Conserved
6mer
54114-54127
0.001
1
6mer
214234-214258
0.001
1
6mer
21915-21936
0.001
1
7mer
185855-185873
0.001
1
6mer
18150-18171
0.001
1
6mer
212449-212467
0.001
1
6mer
13096-13115
0.001
7
6mer
72290-72302
0.001
1
6mer
105571-105595
0.001
0
6mer
117693-117718
0.001
2
6mer
125365-125386
0.001
1
7mer
2348-2374
0.001
0
6mer
246641-246650
0.001
0
6mer
120105-120122
0.001
7
6mer
242385-242407
0.001
1
6mer
104637-104658
0.001
1
7mer
72094-72119
0.001
1
6mer
120426-120435
0.001
4
6mer
83026-83050
0.001
1
6mer
178511-178528
0.001
4
6mer
74960-74974
0.001
2
6mer
234838-234863
0.001
0
6mer
213407-213432
0.001
0
6mer
74960-74976
0.000
2
7mer
185855-185870
0.000
0
6mer
259249-259272
0.000
0
7mer
12933-12950
0.000
2
6mer
29095-29114
0.000
4
6mer
256039-256066
0.000
0
6mer
242267-242281
0.000
Not Conserved
6mer
95139-95160
0.000
0
6mer
256042-256068
0.000
0
6mer
104644-104666
0.000
1
6mer
242318-242335
0.000
Not Conserved
6mer
211563-211573
0.000
0
6mer
140152-140175
0.000
1
6mer
242267-242283
0.000
Not Conserved
AC006548.28
hsa-miR-107
0.999
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
25541-25565
0.012
1
8mer
51063-51080
0.011
Not Conserved
8mer
68148-68168
0.009
0
7mer
28722-28743
0.007
1
7mer
16869-16891
0.006
1
7mer
31206-31228
0.006
Not Conserved
7mer
3842-3859
0.006
1
7mer
42263-42286
0.004
2
7mer
38736-38749
0.004
0
7mer
23095-23110
0.002
1
6mer
14243-14254
0.002
2
8mer
6726-6750
0.002
0
7mer
20585-20601
0.002
1
7mer
37470-37497
0.002
1
7mer
59636-59658
0.002
0
7mer
2389-2415
0.002
1
6mer
17569-17592
0.002
1
7mer
16692-16717
0.002
1
7mer
7335-7352
0.002
0
6mer
56840-56852
0.002
1
6mer
24406-24427
0.002
5
6mer
74593-74611
0.002
0
6mer
67740-67762
0.002
Not Conserved
6mer
17269-17287
0.002
0
7mer
11915-11937
0.001
0
6mer
30991-31006
0.001
0
6mer
36837-36852
0.001
2
6mer
74834-74847
0.001
0
6mer
25840-25850
0.001
0
6mer
10373-10392
0.001
1
6mer
70674-70688
0.001
Not Conserved
6mer
14008-14033
0.001
1
7mer
22271-22283
0.001
Not Conserved
6mer
8588-8604
0.001
2
6mer
12599-12617
0.001
2
6mer
80109-80127
0.001
0
6mer
5226-5240
0.001
1
6mer
67235-67249
0.001
0
7mer
19584-19599
0.001
0
6mer
71614-71641
0.001
Not Conserved
6mer
61389-61413
0.001
Not Conserved
7mer
20470-20494
0.001
1
6mer
52661-52680
0.001
Not Conserved
6mer
8071-8094
0.001
1
6mer
12076-12098
0.001
2
6mer
38284-38298
0.001
1
6mer
10625-10649
0.001
1
6mer
12916-12936
0.001
1
6mer
13546-13567
0.001
0
6mer
82021-82044
0.001
1
6mer
45038-45057
0.001
0
6mer
17105-17123
0.001
1
6mer
38018-38028
0.001
Not Conserved
6mer
17187-17205
0.001
0
7mer
23092-23110
0.001
0
6mer
17846-17868
0.001
0
6mer
19582-19599
0.000
0
6mer
22269-22285
0.000
2
XLOC_001489
hsa-miR-107
0.999
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00002901
Biotype: transcript isomorph
Gene id: XLOC_001489
Gene Name: XLOC_001489
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2449-2459
0.054
1
8mer
44-64
0.045
0
7mer
2449-2468
0.018
1
LINC00662
hsa-miR-107
0.997
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590523
Biotype: lincRNA
Gene id: ENSG00000261824
Gene Name: LINC00662
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
514-532
0.057
0
8mer
859-874
0.043
0
6mer
1573-1597
0.007
0
6mer
1575-1602
0.001
Not Conserved
LINC00662
hsa-miR-107
0.997
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: NR_027301.1
Biotype: lincRNA
Gene id: NR_027301.1 (gene)
Gene Name: LINC00662
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
512-530
0.057
0
8mer
857-872
0.043
0
6mer
1571-1595
0.007
0
6mer
1573-1600
0.001
Not Conserved
XLOC_004195
hsa-miR-107
0.997
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00009182
Biotype: transcript isomorph
Gene id: XLOC_004195
Gene Name: XLOC_004195
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
107-129
0.108
4
SCGB1B2P
hsa-miR-107
0.996
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000595013
Biotype: lincRNA
Gene id: ENSG00000268751
Gene Name: SCGB1B2P
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
24-41
0.050
0
7mer
122-139
0.019
2
6mer
120-131
0.011
2
7mer
469-496
0.009
1
6mer
467-483
0.006
1
6mer
460-483
0.003
0
6mer
484-497
0.002
0
RP11-753N8.1
hsa-miR-107
0.995
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000549313
Biotype: lincRNA
Gene id: ENSG00000258183
Gene Name: RP11-753N8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
102-127
0.099
1
XLOC_013305
hsa-miR-107
0.995
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026763
Biotype: transcript isomorph
Gene id: XLOC_013305
Gene Name: XLOC_013305
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
23-40
0.049
0
7mer
121-138
0.019
2
6mer
119-130
0.011
2
7mer
468-495
0.008
1
6mer
466-482
0.007
1
6mer
459-482
0.003
0
6mer
483-496
0.002
0
RP11-142O6.1
hsa-miR-107
0.995
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000584382
Biotype: sense_intronic
Gene id: ENSG00000266371
Gene Name: RP11-142O6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
231-251
0.097
1
XLOC_010884
hsa-miR-107
0.994
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022565
Biotype: transcript isomorph
Gene id: XLOC_010884
Gene Name: XLOC_010884
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Skeletal Muscle Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
97-113
0.087
1
6mer
212-228
0.006
0
KCNQ1OT1
hsa-miR-107
0.992
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
26334-26358
0.007
0
8mer
60174-60187
0.006
1
7mer
40803-40817
0.005
1
8mer
79140-79160
0.005
Not Conserved
8mer
60097-60113
0.004
3
7mer
76604-76626
0.004
1
7mer
40404-40420
0.004
0
8mer
42560-42585
0.003
1
7mer
78490-78513
0.003
0
7mer
44319-44335
0.003
3
7mer
36773-36795
0.003
0
7mer
85047-85069
0.003
1
7mer
59694-59708
0.002
2
7mer
64791-64816
0.002
1
6mer
49906-49923
0.002
2
6mer
89805-89824
0.002
3
7mer
43622-43639
0.002
1
6mer
88804-88825
0.002
1
7mer
31177-31199
0.002
0
6mer
81445-81458
0.002
3
6mer
84559-84578
0.002
1
6mer
80544-80556
0.002
2
6mer
37230-37246
0.001
0
6mer
23381-23396
0.001
1
6mer
47316-47341
0.001
2
6mer
87394-87405
0.001
3
7mer
3848-3873
0.001
0
6mer
56169-56182
0.001
1
6mer
70827-70845
0.001
1
6mer
67393-67412
0.001
3
6mer
23720-23746
0.001
Not Conserved
6mer
63556-63574
0.001
2
6mer
46333-46347
0.001
0
6mer
63757-63783
0.001
0
6mer
36608-36622
0.001
Not Conserved
6mer
61008-61024
0.001
Not Conserved
7mer
37172-37195
0.001
0
6mer
78466-78491
0.001
1
6mer
59600-59625
0.000
1
6mer
37170-37195
0.000
0
6mer
23379-23396
0.000
1
6mer
70825-70845
0.000
1
6mer
61006-61024
0.000
0
XLOC_007668
hsa-miR-107
0.992
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015561
Biotype: transcript isomorph
Gene id: XLOC_007668
Gene Name: XLOC_007668
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
109-135
0.064
2
7mer
106-117
0.025
2
XLOC_013773
hsa-miR-107
0.991
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028422
Biotype: transcript isomorph
Gene id: XLOC_013773
Gene Name: XLOC_013773
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
43-70
0.013
1
7mer
149-172
0.010
1
7mer
254-279
0.010
1
6mer
5643-5653
0.004
0
7mer
784-798
0.004
1
7mer
624-637
0.004
0
6mer
5591-5603
0.003
0
7mer
837-852
0.003
Not Conserved
7mer
5481-5508
0.003
Not Conserved
7mer
1044-1070
0.002
Not Conserved
6mer
516-542
0.002
0
6mer
5535-5561
0.002
Not Conserved
7mer
5537-5561
0.002
Not Conserved
6mer
732-756
0.002
0
7mer
3127-3141
0.002
0
7mer
1156-1175
0.002
0
7mer
2625-2650
0.002
0
7mer
1345-1372
0.001
0
6mer
1665-1682
0.001
Not Conserved
6mer
5540-5565
0.001
Not Conserved
7mer
3235-3261
0.001
0
7mer
1153-1171
0.001
0
7mer
1963-1987
0.001
Not Conserved
7mer
2885-2906
0.001
Not Conserved
6mer
3767-3789
0.001
Not Conserved
7mer
2356-2382
0.001
0
7mer
2072-2087
0.001
Not Conserved
7mer
1612-1637
0.001
Not Conserved
7mer
2460-2476
0.001
0
7mer
3339-3365
0.001
0
6mer
3449-3473
0.001
Not Conserved
6mer
3342-3369
0.001
0
7mer
2513-2529
0.001
Not Conserved
7mer
1453-1478
0.001
Not Conserved
7mer
2261-2288
0.001
Not Conserved
6mer
1560-1575
0.001
Not Conserved
7mer
2622-2640
0.001
Not Conserved
7mer
2463-2489
0.000
Not Conserved
6mer
2777-2803
0.000
Not Conserved
6mer
2575-2602
0.000
Not Conserved
6mer
3669-3691
0.000
Not Conserved
6mer
2466-2493
0.000
Not Conserved
6mer
1615-1639
0.000
Not Conserved
SCGB1B2P
hsa-miR-107
0.991
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000597830
Biotype: lincRNA
Gene id: ENSG00000268751
Gene Name: SCGB1B2P
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
24-41
0.056
0
7mer
122-139
0.020
2
6mer
120-131
0.012
2
CASC7
hsa-miR-107
0.991
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000560295
Biotype: lincRNA
Gene id: ENSG00000259758
Gene Name: CASC7
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
634-648
0.028
8
7mer
928-944
0.025
9
7mer
1084-1098
0.021
10
7mer
5395-5416
0.004
0
6mer
1203-1219
0.004
7
8mer
5086-5112
0.002
1
6mer
9038-9052
0.002
1
6mer
5238-5256
0.001
0
LINC00960
hsa-miR-107
0.988
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_040005.1
Biotype: lincRNA
Gene id: NR_040005.1 (gene)
Gene Name: LINC00960
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1239-1253
0.080
0
6mer
207-232
0.004
0
LINC00960
hsa-miR-107
0.988
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000463183
Biotype: lincRNA
Gene id: ENSG00000242516
Gene Name: LINC00960
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1290-1304
0.079
0
6mer
97-122
0.004
0
RP11-420K14.8
hsa-miR-107
0.987
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000598561
Biotype: lincRNA
Gene id: ENSG00000268184
Gene Name: RP11-420K14.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
350-375
0.082
1
XLOC_006016
hsa-miR-107
0.987
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013381
Biotype: transcript isomorph
Gene id: XLOC_006016
Gene Name: XLOC_006016
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-107
Sequence: agcagcauuguacagggcuauca
MirBase ID: MIMAT0000104
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
254-274
0.077
11
6mer
9-36
0.004
3
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