LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-106b-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-728E14.3
hsa-miR-106b-5p
0.761
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000577309
Biotype: lincRNA
Gene id: ENSG00000265043
Gene Name: RP11-728E14.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2463-2478
0.025
1
6mer
452-469
0.005
0
LINC01482
hsa-miR-106b-5p
0.760
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000587999
Biotype: lincRNA
Gene id: ENSG00000267659
Gene Name: LINC01482
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
442-455
0.014
2
6mer
517-532
0.008
1
6mer
517-538
0.007
0
LINC01054
hsa-miR-106b-5p
0.760
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000446989
Biotype: antisense
Gene id: ENSG00000229723
Gene Name: LINC01054
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
422-447
0.030
1
FLJ46284
hsa-miR-106b-5p
0.760
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000623616
Biotype: TEC
Gene id: ENSG00000248858
Gene Name: FLJ46284
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
4141-4153
0.009
4
6mer
4093-4109
0.008
5
6mer
2-16
0.005
1
6mer
3413-3423
0.003
1
6mer
1720-1740
0.002
1
6mer
1905-1927
0.002
0
6mer
2192-2216
0.001
0
RP11-286B14.1
hsa-miR-106b-5p
0.760
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000456933
Biotype: lincRNA
Gene id: ENSG00000228971
Gene Name: RP11-286B14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
146-164
0.030
1
XLOC_003200
hsa-miR-106b-5p
0.760
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006577
Biotype: transcript isomorph
Gene id: XLOC_003200
Gene Name: XLOC_003200
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
3-22
0.010
4
7mer
814-840
0.007
0
6mer
1194-1213
0.005
2
6mer
207-227
0.004
0
6mer
473-495
0.003
0
RP5-898I4.1
hsa-miR-106b-5p
0.759
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623740
Biotype: sense_overlapping
Gene id: ENSG00000280395
Gene Name: RP5-898I4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3397-3413
0.018
Not Conserved
7mer
2446-2468
0.005
0
6mer
3458-3471
0.004
1
6mer
1166-1182
0.002
1
ZNF561-AS1
hsa-miR-106b-5p
0.759
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000585797
Biotype: antisense
Gene id: ENSG00000267106
Gene Name: ZNF561-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
110-130
0.029
1
AC011747.4
hsa-miR-106b-5p
0.759
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000454224
Biotype: lincRNA
Gene id: ENSG00000236008
Gene Name: AC011747.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
67-86
0.012
1
6mer
90-101
0.004
1
6mer
487-509
0.004
1
6mer
698-716
0.003
1
8mer
3641-3658
0.003
1
6mer
690-716
0.002
0
6mer
1869-1890
0.001
Not Conserved
PKN2-AS1
hsa-miR-106b-5p
0.759
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000458097
Biotype: antisense
Gene id: ENSG00000237505
Gene Name: PKN2-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
283-303
0.028
6
6mer
2608-2626
0.002
0
XLOC_011210
hsa-miR-106b-5p
0.758
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023348
Biotype: transcript isomorph
Gene id: XLOC_011210
Gene Name: XLOC_011210
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4213-4237
0.016
1
7mer
201-214
0.011
2
6mer
2291-2296
0.002
2
XLOC_004192
hsa-miR-106b-5p
0.758
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008673
Biotype: transcript isomorph
Gene id: XLOC_004192
Gene Name: XLOC_004192
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2468-2487
0.017
1
6mer
3072-3097
0.003
1
6mer
628-654
0.003
2
6mer
2867-2877
0.003
1
6mer
3503-3520
0.002
Not Conserved
6mer
1366-1390
0.002
0
AC012361.1
hsa-miR-106b-5p
0.758
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000447260
Biotype: lincRNA
Gene id: ENSG00000236436
Gene Name: AC012361.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1344-1369
0.020
3
7mer
863-868
0.009
0
LINC01207
hsa-miR-106b-5p
0.757
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000507311
Biotype: lincRNA
Gene id: ENSG00000248771
Gene Name: LINC01207
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2861-2880
0.019
1
6mer
874-878
0.005
2
8mer
1302-1319
0.003
0
6mer
2034-2060
0.003
1
XLOC_012444
hsa-miR-106b-5p
0.757
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025612
Biotype: transcript isomorph
Gene id: XLOC_012444
Gene Name: XLOC_012444
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
558-585
0.020
1
8mer
1078-1095
0.009
1
SVIL-AS1
hsa-miR-106b-5p
0.757
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608994
Biotype: antisense
Gene id: ENSG00000224597
Gene Name: SVIL-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
144-170
0.025
1
6mer
165-179
0.005
0
LINC00907
hsa-miR-106b-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: NR_046455.1
Biotype: lincRNA
Gene id: NR_046455.1 (gene)
Gene Name: LINC00907
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3170-3183
0.018
1
7mer
552-572
0.010
1
6mer
1595-1618
0.002
1
ZNF561-AS1
hsa-miR-106b-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000586614
Biotype: antisense
Gene id: ENSG00000267106
Gene Name: ZNF561-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
110-130
0.029
1
RP11-404P21.5
hsa-miR-106b-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000555383
Biotype: sense_intronic
Gene id: ENSG00000258412
Gene Name: RP11-404P21.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
421-435
0.029
1
RP11-526P5.2
hsa-miR-106b-5p
0.756
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000438753
Biotype: lincRNA
Gene id: ENSG00000235281
Gene Name: RP11-526P5.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
640-655
0.029
2
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept