LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-106b-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
LOC100130872
hsa-miR-106b-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_024569.1
Biotype: sense
Gene id: NR_024569.1 (gene)
Gene Name: LOC100130872
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1827-1852
0.018
0
7mer
3079-3104
0.006
1
7mer
2248-2261
0.004
0
7mer
1582-1603
0.002
0
6mer
2458-2476
0.002
1
XLOC_002759
hsa-miR-106b-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006930
Biotype: transcript isomorph
Gene id: XLOC_002759
Gene Name: XLOC_002759
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5614-5630
0.010
1
8mer
6499-6519
0.009
1
7mer
5284-5307
0.005
1
6mer
6405-6425
0.003
0
6mer
2532-2551
0.002
0
6mer
4189-4208
0.001
1
6mer
3750-3763
0.001
0
STARD13-AS
hsa-miR-106b-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000609233
Biotype: antisense
Gene id: ENSG00000236581
Gene Name: STARD13-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
73-89
0.032
4
STARD13-AS
hsa-miR-106b-5p
0.788
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000608175
Biotype: antisense
Gene id: ENSG00000236581
Gene Name: STARD13-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
33-49
0.032
4
H19
hsa-miR-106b-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000442037
Biotype: lincRNA
Gene id: ENSG00000130600
Gene Name: H19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
661-677
0.032
1
RP11-411K7.1
hsa-miR-106b-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000431554
Biotype: lincRNA
Gene id: ENSG00000236740
Gene Name: RP11-411K7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2625-2643
0.014
1
7mer
2862-2878
0.012
0
6mer
875-889
0.004
2
6mer
1911-1925
0.002
0
XLOC_012083
hsa-miR-106b-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025807
Biotype: transcript isomorph
Gene id: XLOC_012083
Gene Name: XLOC_012083
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
787-814
0.023
1
7mer
646-668
0.009
Not Conserved
LCMT1-AS2
hsa-miR-106b-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565214
Biotype: antisense
Gene id: ENSG00000260034
Gene Name: LCMT1-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1035-1055
0.029
1
6mer
3996-4011
0.003
0
XLOC_013293
hsa-miR-106b-5p
0.787
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027290
Biotype: transcript isomorph
Gene id: XLOC_013293
Gene Name: XLOC_013293
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
10-27
0.032
3
RP1-136B1.1
hsa-miR-106b-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000606542
Biotype: lincRNA
Gene id: ENSG00000272465
Gene Name: RP1-136B1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
23-34
0.013
8
6mer
43-55
0.010
5
6mer
140-159
0.009
8
RP4-753D4.2
hsa-miR-106b-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000412519
Biotype: antisense
Gene id: ENSG00000227599
Gene Name: RP4-753D4.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
766-778
0.023
1
6mer
1535-1554
0.006
1
6mer
1034-1056
0.003
2
CTD-2313F11.1
hsa-miR-106b-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000618221
Biotype: antisense
Gene id: ENSG00000240535
Gene Name: CTD-2313F11.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
242-256
0.032
1
RP11-415D17.3
hsa-miR-106b-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000440220
Biotype: antisense
Gene id: ENSG00000237174
Gene Name: RP11-415D17.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
227-252
0.032
9
XLOC_005703
hsa-miR-106b-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012157
Biotype: transcript isomorph
Gene id: XLOC_005703
Gene Name: XLOC_005703
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
75-95
0.032
1
STARD13-AS
hsa-miR-106b-5p
0.786
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000608205
Biotype: antisense
Gene id: ENSG00000236581
Gene Name: STARD13-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
38-54
0.032
4
RP11-415D17.3
hsa-miR-106b-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000591821
Biotype: antisense
Gene id: ENSG00000237174
Gene Name: RP11-415D17.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
201-226
0.032
9
RP11-133K1.6
hsa-miR-106b-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559030
Biotype: lincRNA
Gene id: ENSG00000259198
Gene Name: RP11-133K1.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3821-3843
0.017
3
7mer
1746-1763
0.005
0
6mer
165-184
0.004
1
6mer
716-726
0.003
0
8mer
1865-1882
0.003
1
RP11-333J10.3
hsa-miR-106b-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000620689
Biotype: sense_intronic
Gene id: ENSG00000277589
Gene Name: RP11-333J10.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
662-675
0.025
0
6mer
255-264
0.007
3
STARD13-AS
hsa-miR-106b-5p
0.784
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000609167
Biotype: antisense
Gene id: ENSG00000236581
Gene Name: STARD13-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
34-50
0.032
4
AC005519.4
hsa-miR-106b-5p
0.784
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000554532
Biotype: sense_overlapping
Gene id: ENSG00000258559
Gene Name: AC005519.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-106b-5p
Sequence: uaaagugcugacagugcagau
MirBase ID: MIMAT0000680
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
553-567
0.024
0
8mer
1257-1277
0.008
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept