LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-106a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
HAGLR
hsa-miR-106a-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000413969
Biotype: antisense
Gene id: ENSG00000224189
Gene Name: HAGLR
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
33-59
0.016
4
7mer
252-274
0.011
1
LINC01498
hsa-miR-106a-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000502160
Biotype: antisense
Gene id: ENSG00000247213
Gene Name: LINC01498
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2668-2689
0.018
1
7mer
52-72
0.009
0
XLOC_003836
hsa-miR-106a-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008383
Biotype: transcript isomorph
Gene id: XLOC_003836
Gene Name: XLOC_003836
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
80-101
0.025
0
6mer
782-802
0.002
0
LINC-PINT
hsa-miR-106a-5p
0.728
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_015431.1
Biotype: lincRNA
Gene id: NR_015431.1 (gene)
Gene Name: LINC-PINT
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
300-317
0.015
4
6mer
2660-2680
0.006
1
6mer
800-822
0.003
1
6mer
1705-1717
0.002
1
6mer
1440-1462
0.001
1
RP11-119F7.5
hsa-miR-106a-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000562082
Biotype: sense_overlapping
Gene id: ENSG00000260400
Gene Name: RP11-119F7.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1741-1762
0.010
0
8mer
419-442
0.008
1
6mer
264-269
0.005
0
6mer
1196-1219
0.004
4
XLOC_009900
hsa-miR-106a-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020237
Biotype: transcript isomorph
Gene id: XLOC_009900
Gene Name: XLOC_009900
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1383-1402
0.015
1
8mer
1094-1113
0.007
0
6mer
1539-1564
0.003
1
6mer
634-658
0.002
1
RP11-365O16.6
hsa-miR-106a-5p
0.727
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000420350
Biotype: antisense
Gene id: ENSG00000237101
Gene Name: RP11-365O16.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1289-1315
0.019
0
6mer
199-222
0.008
2
AC012506.3
hsa-miR-106a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000426527
Biotype: lincRNA
Gene id: ENSG00000223634
Gene Name: AC012506.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
396-418
0.022
1
7mer
232-254
0.005
1
AL133245.2
hsa-miR-106a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000608925
Biotype: lincRNA
Gene id: ENSG00000272754
Gene Name: AL133245.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1104-1122
0.023
0
8mer
705-724
0.004
Not Conserved
RP11-111F5.8
hsa-miR-106a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000428709
Biotype: lincRNA
Gene id: ENSG00000233651
Gene Name: RP11-111F5.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1015-1036
0.014
0
6mer
3085-3110
0.007
0
6mer
2402-2418
0.005
0
XLOC_002722
hsa-miR-106a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006118
Biotype: transcript isomorph
Gene id: XLOC_002722
Gene Name: XLOC_002722
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Skeletal Muscle Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
523-550
0.005
1
7mer
6436-6463
0.004
Not Conserved
6mer
6645-6653
0.004
1
6mer
6403-6426
0.003
Not Conserved
7mer
3882-3901
0.003
0
6mer
1157-1171
0.002
0
6mer
2789-2814
0.002
0
6mer
4288-4301
0.001
0
6mer
5328-5355
0.001
Not Conserved
6mer
4422-4440
0.001
Not Conserved
RP11-327L9.1
hsa-miR-106a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000622930
Biotype: lincRNA
Gene id: ENSG00000280366
Gene Name: RP11-327L9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
483-497
0.014
2
6mer
373-398
0.013
7
XLOC_002100
hsa-miR-106a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00002752
Biotype: transcript isomorph
Gene id: XLOC_002100
Gene Name: XLOC_002100
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
101-123
0.007
1
6mer
376-403
0.007
4
7mer
1117-1127
0.005
2
6mer
752-761
0.004
3
7mer
1535-1552
0.003
2
RP11-345P4.7
hsa-miR-106a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000596308
Biotype: antisense
Gene id: ENSG00000269737
Gene Name: RP11-345P4.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
108-131
0.011
1
8mer
1112-1137
0.011
1
6mer
49-71
0.005
0
RP5-1065J22.8
hsa-miR-106a-5p
0.726
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000608574
Biotype: antisense
Gene id: ENSG00000273382
Gene Name: RP5-1065J22.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2156-2175
0.007
Not Conserved
8mer
700-723
0.007
1
8mer
2289-2307
0.006
1
8mer
1045-1068
0.005
1
6mer
1672-1692
0.002
1
AC090587.2
hsa-miR-106a-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000507938
Biotype: sense_overlapping
Gene id: ENSG00000250404
Gene Name: AC090587.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2434-2457
0.006
1
8mer
1349-1368
0.006
1
6mer
734-756
0.005
9
6mer
2377-2402
0.004
0
6mer
523-547
0.003
3
7mer
680-705
0.002
0
RP11-467L13.7
hsa-miR-106a-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000619086
Biotype: antisense
Gene id: ENSG00000276900
Gene Name: RP11-467L13.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
409-427
0.023
1
6mer
1053-1071
0.003
2
HAGLR
hsa-miR-106a-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000549329
Biotype: antisense
Gene id: ENSG00000224189
Gene Name: HAGLR
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
103-129
0.016
4
7mer
322-344
0.011
1
RP11-384P7.7
hsa-miR-106a-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000566968
Biotype: lincRNA
Gene id: ENSG00000260947
Gene Name: RP11-384P7.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
402-420
0.006
1
6mer
3399-3420
0.006
1
9mer
1431-1449
0.005
0
6mer
2262-2271
0.004
1
6mer
2663-2687
0.003
1
6mer
1526-1543
0.001
0
XLOC_010383
hsa-miR-106a-5p
0.725
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021785
Biotype: transcript isomorph
Gene id: XLOC_010383
Gene Name: XLOC_010383
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
- Ovary Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
804-816
0.022
0
6mer
138-150
0.004
Not Conserved
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept