LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-106a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
ZNF561-AS1
hsa-miR-106a-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000616951
Biotype: processed_transcript
Gene id: ENSG00000267106
Gene Name: ZNF561-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
58-81
0.034
1
CTD-2619J13.8
hsa-miR-106a-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000599109
Biotype: processed_transcript
Gene id: ENSG00000268230
Gene Name: CTD-2619J13.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
71-85
0.020
1
6mer
106-125
0.006
0
6mer
928-953
0.003
Not Conserved
6mer
731-747
0.003
0
6mer
2215-2231
0.002
1
XLOC_000294
hsa-miR-106a-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001027
Biotype: transcript isomorph
Gene id: XLOC_000294
Gene Name: XLOC_000294
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
173-193
0.010
Not Conserved
7mer
4396-4411
0.005
3
7mer
961-980
0.005
1
7mer
5830-5846
0.003
2
8mer
4876-4899
0.003
0
6mer
6338-6361
0.002
1
6mer
7526-7552
0.002
1
6mer
5497-5511
0.002
1
6mer
1294-1319
0.001
1
RP11-256L6.3
hsa-miR-106a-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000551849
Biotype: antisense
Gene id: ENSG00000257878
Gene Name: RP11-256L6.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
715-740
0.018
1
8mer
414-433
0.010
0
7mer
501-524
0.007
1
RP11-731J8.2
hsa-miR-106a-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000562284
Biotype: sense_overlapping
Gene id: ENSG00000260918
Gene Name: RP11-731J8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
6679-6697
0.009
6
6mer
6417-6439
0.006
1
7mer
3187-3208
0.004
0
6mer
5641-5655
0.003
6
6mer
5504-5525
0.003
5
8mer
4334-4352
0.003
0
6mer
2065-2091
0.002
1
6mer
2978-3001
0.002
2
6mer
4694-4713
0.002
2
RP11-1437A8.4
hsa-miR-106a-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563960
Biotype: lincRNA
Gene id: ENSG00000260827
Gene Name: RP11-1437A8.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1638-1664
0.013
0
6mer
1435-1458
0.011
0
6mer
584-598
0.010
0
RP11-798G7.8
hsa-miR-106a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000587960
Biotype: lincRNA
Gene id: ENSG00000266918
Gene Name: RP11-798G7.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1797-1821
0.016
1
6mer
789-813
0.006
2
8mer
1311-1329
0.005
1
6mer
1830-1856
0.004
1
6mer
1245-1263
0.003
3
LINC01533
hsa-miR-106a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588694
Biotype: lincRNA
Gene id: ENSG00000267779
Gene Name: LINC01533
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
539-560
0.034
5
XLOC_004362
hsa-miR-106a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00009934
Biotype: transcript isomorph
Gene id: XLOC_004362
Gene Name: XLOC_004362
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
- Breast Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7630-7652
0.010
0
7mer
7671-7676
0.005
1
6mer
7711-7728
0.005
1
6mer
1005-1030
0.004
1
8mer
3720-3739
0.004
0
7mer
2849-2870
0.003
0
6mer
3746-3766
0.002
1
6mer
2949-2975
0.001
0
RP11-856M7.6
hsa-miR-106a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584734
Biotype: lincRNA
Gene id: ENSG00000266604
Gene Name: RP11-856M7.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
290-306
0.021
0
6mer
281-300
0.012
0
NFIA-AS1
hsa-miR-106a-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000596404
Biotype: lincRNA
Gene id: ENSG00000237853
Gene Name: NFIA-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
184-208
0.027
0
6mer
43-53
0.007
2
RP11-576N17.5
hsa-miR-106a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000515670
Biotype: lincRNA
Gene id: ENSG00000250057
Gene Name: RP11-576N17.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
119-138
0.034
1
RP11-384G23.1
hsa-miR-106a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000615176
Biotype: lincRNA
Gene id: ENSG00000273919
Gene Name: RP11-384G23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1623-1645
0.023
1
6mer
1580-1597
0.005
3
7mer
374-396
0.005
1
ZNF561-AS1
hsa-miR-106a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587536
Biotype: antisense
Gene id: ENSG00000267106
Gene Name: ZNF561-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
94-117
0.034
1
XLOC_002263
hsa-miR-106a-5p
0.802
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00003368
Biotype: transcript isomorph
Gene id: XLOC_002263
Gene Name: XLOC_002263
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
42-57
0.034
8
AC009120.10
hsa-miR-106a-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000561669
Biotype: lincRNA
Gene id: ENSG00000261248
Gene Name: AC009120.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
382-405
0.019
1
6mer
192-217
0.014
2
RP11-412D9.4
hsa-miR-106a-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000570282
Biotype: antisense
Gene id: ENSG00000260329
Gene Name: RP11-412D9.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1363-1381
0.026
1
6mer
765-790
0.005
2
6mer
707-720
0.002
0
XLOC_003079
hsa-miR-106a-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006467
Biotype: transcript isomorph
Gene id: XLOC_003079
Gene Name: XLOC_003079
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
256-281
0.033
1
RP11-733C7.1
hsa-miR-106a-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000507220
Biotype: lincRNA
Gene id: ENSG00000249091
Gene Name: RP11-733C7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
245-259
0.021
1
6mer
267-288
0.007
1
6mer
128-153
0.005
1
XLOC_013753
hsa-miR-106a-5p
0.801
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00027891
Biotype: transcript isomorph
Gene id: XLOC_013753
Gene Name: XLOC_013753
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
989-1012
0.017
1
9mer
491-516
0.007
1
6mer
39-63
0.007
1
6mer
656-681
0.002
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept