LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-let-7a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
TTTY15
hsa-let-7a-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000440408
Biotype: lincRNA
Gene id: ENSG00000233864
Gene Name: TTTY15
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2427-2445
0.019
0
6mer
555-580
0.009
0
6mer
4105-4126
0.005
0
AC011518.2
hsa-let-7a-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000592668
Biotype: lincRNA
Gene id: ENSG00000267133
Gene Name: AC011518.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
108-123
0.032
8
BACE1-AS
hsa-let-7a-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000618857
Biotype: antisense
Gene id: ENSG00000278768
Gene Name: BACE1-AS
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
235-258
0.010
10
8mer+wobble
155-170
0.010
2
6mer
303-316
0.005
5
8mer+wobble
147-163
0.005
0
6mer
361-383
0.003
1
XLOC_008323
hsa-let-7a-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017647
Biotype: transcript isomorph
Gene id: XLOC_008323
Gene Name: XLOC_008323
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
379-401
0.032
0
C3orf65
hsa-let-7a-5p
0.785
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000470754
Biotype: antisense
Gene id: ENSG00000163915
Gene Name: C3orf65
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
80-99
0.026
1
6mer
271-294
0.006
2
XLOC_010622
hsa-let-7a-5p
0.784
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00021656
Biotype: transcript isomorph
Gene id: XLOC_010622
Gene Name: XLOC_010622
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2283-2304
0.020
0
7mer
3602-3613
0.004
2
6mer
5307-5324
0.004
1
6mer
167-190
0.002
0
6mer
2066-2091
0.002
1
RP11-629B11.5
hsa-let-7a-5p
0.783
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000600169
Biotype: antisense
Gene id: ENSG00000269559
Gene Name: RP11-629B11.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1769-1784
0.032
7
TTTY15
hsa-let-7a-5p
0.782
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: NR_001545.2
Biotype: lincRNA
Gene id: NR_001545.2 (gene)
Gene Name: TTTY15
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2394-2412
0.019
0
6mer
522-547
0.008
0
6mer
4072-4093
0.005
0
LINC01350
hsa-let-7a-5p
0.780
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000439633
Biotype: lincRNA
Gene id: ENSG00000228309
Gene Name: LINC01350
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
432-452
0.031
0
RP4-798P15.3
hsa-let-7a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000466953
Biotype: retained_intron
Gene id: ENSG00000254154
Gene Name: RP4-798P15.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
247-265
0.025
6
6mer
260-285
0.004
3
6mer
3030-3055
0.002
8
CTB-33O18.3
hsa-let-7a-5p
0.779
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000519897
Biotype: antisense
Gene id: ENSG00000253955
Gene Name: CTB-33O18.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1028-1051
0.031
1
XLOC_009868
hsa-let-7a-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020555
Biotype: transcript isomorph
Gene id: XLOC_009868
Gene Name: XLOC_009868
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2373-2400
0.015
1
7mer
710-722
0.008
1
7mer
1696-1713
0.006
1
6mer
950-970
0.002
1
RP4-798P15.3
hsa-let-7a-5p
0.778
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000354921
Biotype: processed_transcript
Gene id: ENSG00000254154
Gene Name: RP4-798P15.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
250-268
0.025
6
6mer
263-288
0.004
3
6mer
3030-3055
0.002
8
RP11-529E15.1
hsa-let-7a-5p
0.775
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000606468
Biotype: lincRNA
Gene id: ENSG00000272027
Gene Name: RP11-529E15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
251-265
0.031
Not Conserved
XLOC_002951
hsa-let-7a-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006331
Biotype: transcript isomorph
Gene id: XLOC_002951
Gene Name: XLOC_002951
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
534-551
0.028
2
6mer
428-451
0.003
1
IQCF5-AS1
hsa-let-7a-5p
0.774
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000440723
Biotype: antisense
Gene id: ENSG00000235455
Gene Name: IQCF5-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
619-644
0.029
2
6mer
861-877
0.002
2
RP11-421F16.3
hsa-let-7a-5p
0.773
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000500632
Biotype: antisense
Gene id: ENSG00000247903
Gene Name: RP11-421F16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2522-2535
0.017
1
6mer
2454-2478
0.008
2
6mer
2439-2461
0.006
0
LINC01206
hsa-let-7a-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000610910
Biotype: lincRNA
Gene id: ENSG00000242512
Gene Name: LINC01206
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
155-180
0.031
0
LINC-PINT
hsa-let-7a-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000451786
Biotype: antisense
Gene id: ENSG00000231721
Gene Name: LINC-PINT
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3048-3062
0.023
9
7mer
718-734
0.006
2
6mer
1377-1403
0.001
2
TTC28-AS1
hsa-let-7a-5p
0.772
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000428584
Biotype: antisense
Gene id: ENSG00000235954
Gene Name: TTC28-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-let-7a-5p
Sequence: ugagguaguagguuguauaguu
MirBase ID: MIMAT0000062
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5303-5315
0.028
1
7mer
3224-3241
0.003
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept